Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM42Q8IWZ5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM42Q8IWZ5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM42Q8IWZ5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM42Q8IWZ5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM42Q8IWZ5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TRIM42Q8IWZ5 AC099778.1-201ENST00000568593 1911 ntBASIC20.46■□□□□ 0.87
TRIM42Q8IWZ5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM42Q8IWZ5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 DUX4L19-201ENST00000557448 1267 ntBASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 AC136469.2-201ENST00000623944 1028 ntBASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM42Q8IWZ5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM42Q8IWZ5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM42Q8IWZ5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM42Q8IWZ5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM42Q8IWZ5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM42Q8IWZ5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM42Q8IWZ5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM42Q8IWZ5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM42Q8IWZ5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM42Q8IWZ5 AC096631.2-201ENST00000436136 790 ntBASIC20.44■□□□□ 0.86
TRIM42Q8IWZ5 SLC47A1P1-202ENST00000449666 945 ntBASIC20.44■□□□□ 0.86
TRIM42Q8IWZ5 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM42Q8IWZ5 SMUG1P1-201ENST00000590640 811 ntBASIC20.44■□□□□ 0.86
TRIM42Q8IWZ5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM42Q8IWZ5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM42Q8IWZ5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TRIM42Q8IWZ5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TRIM42Q8IWZ5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM42Q8IWZ5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 SYT6-210ENST00000641643 1587 ntBASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 AC009237.3-201ENST00000393279 1427 ntBASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM42Q8IWZ5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 SERBP1P1-201ENST00000396021 1160 ntBASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 AL139246.5-201ENST00000606645 996 ntBASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 AC011484.1-201ENST00000377652 1995 ntBASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM42Q8IWZ5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TRIM42Q8IWZ5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TRIM42Q8IWZ5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM42Q8IWZ5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM42Q8IWZ5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM42Q8IWZ5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM42Q8IWZ5 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM42Q8IWZ5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
TRIM42Q8IWZ5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM42Q8IWZ5 AC011298.3-201ENST00000615796 283 ntBASIC20.41■□□□□ 0.86
TRIM42Q8IWZ5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRIM42Q8IWZ5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM42Q8IWZ5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM42Q8IWZ5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms