Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 AC105020.6-201ENST00000621523 1217 ntBASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC60Q8IWA6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC60Q8IWA6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC60Q8IWA6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC60Q8IWA6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.95■■□□□ 1.26
CCDC60Q8IWA6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC60Q8IWA6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.95■■□□□ 1.26
CCDC60Q8IWA6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC60Q8IWA6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC60Q8IWA6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
CCDC60Q8IWA6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC60Q8IWA6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC60Q8IWA6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.95■■□□□ 1.26
CCDC60Q8IWA6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.95■■□□□ 1.26
CCDC60Q8IWA6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 AL049796.1-201ENST00000565336 1766 ntBASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 AC087633.2-202ENST00000565166 1439 ntBASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 AC011484.1-201ENST00000377652 1995 ntBASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 FEM1AP4-201ENST00000443167 1987 ntBASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 AC079834.2-201ENST00000609776 1949 ntBASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC60Q8IWA6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
CCDC60Q8IWA6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
CCDC60Q8IWA6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.93■■□□□ 1.26
CCDC60Q8IWA6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCDC60Q8IWA6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.93■■□□□ 1.26
CCDC60Q8IWA6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
CCDC60Q8IWA6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.93■■□□□ 1.26
CCDC60Q8IWA6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.93■■□□□ 1.26
CCDC60Q8IWA6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CCDC60Q8IWA6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CCDC60Q8IWA6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 POU5F1P3-201ENST00000428824 1078 ntBASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 AF106564.1-201ENST00000607058 2553 ntBASIC22.92■■□□□ 1.26
CCDC60Q8IWA6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC60Q8IWA6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC60Q8IWA6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC60Q8IWA6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC60Q8IWA6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.91■■□□□ 1.26
CCDC60Q8IWA6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.91■■□□□ 1.26
CCDC60Q8IWA6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
CCDC60Q8IWA6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.91■■□□□ 1.26
CCDC60Q8IWA6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC22.91■■□□□ 1.26
CCDC60Q8IWA6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.91■■□□□ 1.26
CCDC60Q8IWA6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
CCDC60Q8IWA6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.91■■□□□ 1.26
CCDC60Q8IWA6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC60Q8IWA6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.91■■□□□ 1.26
CCDC60Q8IWA6 TMEM191A-211ENST00000637163 1067 ntBASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms