Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APLFQ8IW19 AC026471.1-201ENST00000564629 3026 ntBASIC20.29■□□□□ 0.84
APLFQ8IW19 AC004687.1-201ENST00000579003 1625 ntBASIC20.29■□□□□ 0.84
APLFQ8IW19 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
APLFQ8IW19 KRT18P11-201ENST00000435214 1283 ntBASIC20.29■□□□□ 0.84
APLFQ8IW19 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.29■□□□□ 0.84
APLFQ8IW19 SMUG1P1-201ENST00000590640 811 ntBASIC20.29■□□□□ 0.84
APLFQ8IW19 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.29■□□□□ 0.84
APLFQ8IW19 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.29■□□□□ 0.84
APLFQ8IW19 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APLFQ8IW19 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APLFQ8IW19 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.29■□□□□ 0.84
APLFQ8IW19 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APLFQ8IW19 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APLFQ8IW19 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
APLFQ8IW19 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APLFQ8IW19 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APLFQ8IW19 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APLFQ8IW19 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.29■□□□□ 0.84
APLFQ8IW19 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
APLFQ8IW19 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.28■□□□□ 0.84
APLFQ8IW19 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APLFQ8IW19 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APLFQ8IW19 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APLFQ8IW19 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.28■□□□□ 0.84
APLFQ8IW19 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
APLFQ8IW19 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APLFQ8IW19 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APLFQ8IW19 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APLFQ8IW19 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
APLFQ8IW19 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APLFQ8IW19 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APLFQ8IW19 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APLFQ8IW19 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.28■□□□□ 0.84
APLFQ8IW19 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APLFQ8IW19 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
APLFQ8IW19 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
APLFQ8IW19 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.28■□□□□ 0.84
APLFQ8IW19 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APLFQ8IW19 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.27■□□□□ 0.84
APLFQ8IW19 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
APLFQ8IW19 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APLFQ8IW19 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
APLFQ8IW19 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APLFQ8IW19 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APLFQ8IW19 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
APLFQ8IW19 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APLFQ8IW19 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APLFQ8IW19 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APLFQ8IW19 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.27■□□□□ 0.84
APLFQ8IW19 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.27■□□□□ 0.84
APLFQ8IW19 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.27■□□□□ 0.84
APLFQ8IW19 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.27■□□□□ 0.84
APLFQ8IW19 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.27■□□□□ 0.84
APLFQ8IW19 AC104771.1-201ENST00000603335 964 ntBASIC20.27■□□□□ 0.84
APLFQ8IW19 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APLFQ8IW19 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.27■□□□□ 0.84
APLFQ8IW19 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.26■□□□□ 0.83
APLFQ8IW19 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
APLFQ8IW19 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
APLFQ8IW19 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APLFQ8IW19 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
APLFQ8IW19 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
APLFQ8IW19 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.26■□□□□ 0.83
APLFQ8IW19 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
APLFQ8IW19 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
APLFQ8IW19 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.26■□□□□ 0.83
APLFQ8IW19 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APLFQ8IW19 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.26■□□□□ 0.83
APLFQ8IW19 Z98882.1-201ENST00000622160 2253 ntBASIC20.26■□□□□ 0.83
APLFQ8IW19 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APLFQ8IW19 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
APLFQ8IW19 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
APLFQ8IW19 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APLFQ8IW19 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APLFQ8IW19 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
APLFQ8IW19 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APLFQ8IW19 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.25■□□□□ 0.83
APLFQ8IW19 SMG8-203ENST00000578922 2178 ntBASIC20.25■□□□□ 0.83
APLFQ8IW19 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APLFQ8IW19 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
APLFQ8IW19 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.25■□□□□ 0.83
APLFQ8IW19 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.25■□□□□ 0.83
APLFQ8IW19 AC006970.2-201ENST00000450065 779 ntBASIC20.25■□□□□ 0.83
APLFQ8IW19 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APLFQ8IW19 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.24■□□□□ 0.83
APLFQ8IW19 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APLFQ8IW19 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
APLFQ8IW19 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.24■□□□□ 0.83
APLFQ8IW19 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.24■□□□□ 0.83
APLFQ8IW19 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.24■□□□□ 0.83
APLFQ8IW19 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
APLFQ8IW19 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APLFQ8IW19 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.24■□□□□ 0.83
APLFQ8IW19 CROCCP5-201ENST00000436658 830 ntBASIC20.24■□□□□ 0.83
APLFQ8IW19 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.24■□□□□ 0.83
APLFQ8IW19 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.24■□□□□ 0.83
APLFQ8IW19 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.24■□□□□ 0.83
APLFQ8IW19 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APLFQ8IW19 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms