Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.62■□□□□ 0.57
CROCCP3Q8IVE0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.62■□□□□ 0.57
CROCCP3Q8IVE0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.62■□□□□ 0.57
CROCCP3Q8IVE0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CROCCP3Q8IVE0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CROCCP3Q8IVE0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 AC007613.1-201ENST00000572811 2597 ntBASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 AL049812.1-201ENST00000432563 2267 ntBASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CROCCP3Q8IVE0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 AC079089.2-201ENST00000531211 1277 ntBASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 MIR6722-201ENST00000617286 78 ntBASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 AC074183.2-201ENST00000623112 922 ntBASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CROCCP3Q8IVE0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CROCCP3Q8IVE0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CROCCP3Q8IVE0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CROCCP3Q8IVE0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CROCCP3Q8IVE0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CROCCP3Q8IVE0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CROCCP3Q8IVE0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CROCCP3Q8IVE0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CROCCP3Q8IVE0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.59■□□□□ 0.57
CROCCP3Q8IVE0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.59■□□□□ 0.57
CROCCP3Q8IVE0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.59■□□□□ 0.57
CROCCP3Q8IVE0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CROCCP3Q8IVE0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CROCCP3Q8IVE0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CROCCP3Q8IVE0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CROCCP3Q8IVE0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.59■□□□□ 0.57
CROCCP3Q8IVE0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CROCCP3Q8IVE0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CROCCP3Q8IVE0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CROCCP3Q8IVE0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
CROCCP3Q8IVE0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CROCCP3Q8IVE0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CROCCP3Q8IVE0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CROCCP3Q8IVE0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CROCCP3Q8IVE0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CROCCP3Q8IVE0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CROCCP3Q8IVE0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CROCCP3Q8IVE0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CROCCP3Q8IVE0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
CROCCP3Q8IVE0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CROCCP3Q8IVE0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CROCCP3Q8IVE0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CROCCP3Q8IVE0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CROCCP3Q8IVE0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CROCCP3Q8IVE0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CROCCP3Q8IVE0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
CROCCP3Q8IVE0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 AL512408.1-201ENST00000569378 2000 ntBASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms