Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.18■■□□□ 1.14
NPAS4Q8IUM7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPAS4Q8IUM7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPAS4Q8IUM7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NPAS4Q8IUM7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPAS4Q8IUM7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 AC005829.2-201ENST00000571422 1056 ntBASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 AC120498.8-201ENST00000614275 531 ntBASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.17■■□□□ 1.14
NPAS4Q8IUM7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 AC012618.2-201ENST00000428058 849 ntBASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NPAS4Q8IUM7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 AC133681.1-201ENST00000465482 601 ntBASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 AC124016.1-201ENST00000609552 612 ntBASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 AL356652.1-201ENST00000615962 565 ntBASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.15■■□□□ 1.14
NPAS4Q8IUM7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
NPAS4Q8IUM7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.14
NPAS4Q8IUM7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
NPAS4Q8IUM7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.14■■□□□ 1.14
NPAS4Q8IUM7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.14■■□□□ 1.14
NPAS4Q8IUM7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 AC233702.5-201ENST00000584107 538 ntBASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms