Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.01■□□□□ 0.63
VRK2Q86Y07 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
VRK2Q86Y07 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VRK2Q86Y07 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VRK2Q86Y07 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VRK2Q86Y07 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
VRK2Q86Y07 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VRK2Q86Y07 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
VRK2Q86Y07 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.01■□□□□ 0.63
VRK2Q86Y07 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.01■□□□□ 0.63
VRK2Q86Y07 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VRK2Q86Y07 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VRK2Q86Y07 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
VRK2Q86Y07 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VRK2Q86Y07 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VRK2Q86Y07 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VRK2Q86Y07 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19■□□□□ 0.63
VRK2Q86Y07 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VRK2Q86Y07 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VRK2Q86Y07 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
VRK2Q86Y07 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19■□□□□ 0.63
VRK2Q86Y07 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19■□□□□ 0.63
VRK2Q86Y07 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19■□□□□ 0.63
VRK2Q86Y07 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19■□□□□ 0.63
VRK2Q86Y07 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19■□□□□ 0.63
VRK2Q86Y07 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
VRK2Q86Y07 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VRK2Q86Y07 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19■□□□□ 0.63
VRK2Q86Y07 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VRK2Q86Y07 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VRK2Q86Y07 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.99■□□□□ 0.63
VRK2Q86Y07 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VRK2Q86Y07 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK2Q86Y07 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.99■□□□□ 0.63
VRK2Q86Y07 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VRK2Q86Y07 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.99■□□□□ 0.63
VRK2Q86Y07 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK2Q86Y07 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.99■□□□□ 0.63
VRK2Q86Y07 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.99■□□□□ 0.63
VRK2Q86Y07 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
VRK2Q86Y07 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.99■□□□□ 0.63
VRK2Q86Y07 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK2Q86Y07 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.99■□□□□ 0.63
VRK2Q86Y07 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.99■□□□□ 0.63
VRK2Q86Y07 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.99■□□□□ 0.63
VRK2Q86Y07 KRT18P61-201ENST00000585825 1298 ntBASIC18.99■□□□□ 0.63
VRK2Q86Y07 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.99■□□□□ 0.63
VRK2Q86Y07 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.99■□□□□ 0.63
VRK2Q86Y07 AL391422.3-201ENST00000603791 2761 ntBASIC18.99■□□□□ 0.63
VRK2Q86Y07 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK2Q86Y07 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
VRK2Q86Y07 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.99■□□□□ 0.63
VRK2Q86Y07 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
VRK2Q86Y07 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VRK2Q86Y07 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK2Q86Y07 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK2Q86Y07 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK2Q86Y07 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK2Q86Y07 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VRK2Q86Y07 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VRK2Q86Y07 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VRK2Q86Y07 AL121603.2-201ENST00000557373 2117 ntBASIC18.98■□□□□ 0.63
VRK2Q86Y07 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VRK2Q86Y07 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VRK2Q86Y07 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK2Q86Y07 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK2Q86Y07 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK2Q86Y07 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
VRK2Q86Y07 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK2Q86Y07 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK2Q86Y07 KRT18P20-201ENST00000548986 1279 ntBASIC18.98■□□□□ 0.63
VRK2Q86Y07 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
VRK2Q86Y07 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK2Q86Y07 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
VRK2Q86Y07 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
VRK2Q86Y07 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.98■□□□□ 0.63
VRK2Q86Y07 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.98■□□□□ 0.63
VRK2Q86Y07 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
VRK2Q86Y07 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
VRK2Q86Y07 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VRK2Q86Y07 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK2Q86Y07 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK2Q86Y07 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK2Q86Y07 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK2Q86Y07 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK2Q86Y07 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.97■□□□□ 0.63
VRK2Q86Y07 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.97■□□□□ 0.63
VRK2Q86Y07 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
VRK2Q86Y07 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK2Q86Y07 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VRK2Q86Y07 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.97■□□□□ 0.63
VRK2Q86Y07 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.97■□□□□ 0.63
VRK2Q86Y07 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK2Q86Y07 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK2Q86Y07 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK2Q86Y07 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.97■□□□□ 0.63
VRK2Q86Y07 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.97■□□□□ 0.63
VRK2Q86Y07 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.97■□□□□ 0.63
VRK2Q86Y07 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.97■□□□□ 0.63
VRK2Q86Y07 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms