Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC25Q86WR0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC25Q86WR0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC25Q86WR0 AC126544.1-201ENST00000580842 1059 ntBASIC21.18■□□□□ 0.98
CCDC25Q86WR0 MIR4767-201ENST00000582827 78 ntBASIC21.18■□□□□ 0.98
CCDC25Q86WR0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC25Q86WR0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC25Q86WR0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC25Q86WR0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
CCDC25Q86WR0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC25Q86WR0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC25Q86WR0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC25Q86WR0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC25Q86WR0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC25Q86WR0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC25Q86WR0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC25Q86WR0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC25Q86WR0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC25Q86WR0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC25Q86WR0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CCDC25Q86WR0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC25Q86WR0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC25Q86WR0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC25Q86WR0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC25Q86WR0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC25Q86WR0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC25Q86WR0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC25Q86WR0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC25Q86WR0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC25Q86WR0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC25Q86WR0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC25Q86WR0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC25Q86WR0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC25Q86WR0 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC25Q86WR0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC25Q86WR0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC25Q86WR0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC25Q86WR0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC25Q86WR0 BX005040.4-201ENST00000637145 1518 ntBASIC21.16■□□□□ 0.98
CCDC25Q86WR0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC25Q86WR0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC25Q86WR0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC25Q86WR0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC25Q86WR0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC25Q86WR0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC25Q86WR0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC25Q86WR0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC25Q86WR0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCDC25Q86WR0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC25Q86WR0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC25Q86WR0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC25Q86WR0 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC25Q86WR0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.15■□□□□ 0.98
CCDC25Q86WR0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC25Q86WR0 AC099778.1-201ENST00000568593 1911 ntBASIC21.15■□□□□ 0.98
CCDC25Q86WR0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC25Q86WR0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC25Q86WR0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC25Q86WR0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCDC25Q86WR0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCDC25Q86WR0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CCDC25Q86WR0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC25Q86WR0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC25Q86WR0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC25Q86WR0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC25Q86WR0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC25Q86WR0 AC233992.3-201ENST00000607491 485 ntBASIC21.14■□□□□ 0.97
CCDC25Q86WR0 AL162377.1-201ENST00000618844 1793 ntBASIC21.14■□□□□ 0.97
CCDC25Q86WR0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC25Q86WR0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC25Q86WR0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC25Q86WR0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC25Q86WR0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CCDC25Q86WR0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC25Q86WR0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC25Q86WR0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC25Q86WR0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC25Q86WR0 AC005224.4-201ENST00000583262 1652 ntBASIC21.13■□□□□ 0.97
CCDC25Q86WR0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC25Q86WR0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC25Q86WR0 IGHV3-19-201ENST00000521488 291 ntBASIC21.13■□□□□ 0.97
CCDC25Q86WR0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC25Q86WR0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC25Q86WR0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CCDC25Q86WR0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC25Q86WR0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CCDC25Q86WR0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC25Q86WR0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC25Q86WR0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC25Q86WR0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC25Q86WR0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC25Q86WR0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CCDC25Q86WR0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC25Q86WR0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC25Q86WR0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC25Q86WR0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC25Q86WR0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC25Q86WR0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC25Q86WR0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC25Q86WR0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms