Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.53■□□□□ 0.88
LDB1Q86U70 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
LDB1Q86U70 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
LDB1Q86U70 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LDB1Q86U70 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
LDB1Q86U70 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.53■□□□□ 0.88
LDB1Q86U70 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LDB1Q86U70 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LDB1Q86U70 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LDB1Q86U70 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LDB1Q86U70 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LDB1Q86U70 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LDB1Q86U70 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.52■□□□□ 0.88
LDB1Q86U70 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LDB1Q86U70 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.52■□□□□ 0.88
LDB1Q86U70 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
LDB1Q86U70 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LDB1Q86U70 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LDB1Q86U70 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.52■□□□□ 0.88
LDB1Q86U70 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LDB1Q86U70 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LDB1Q86U70 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.52■□□□□ 0.88
LDB1Q86U70 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.52■□□□□ 0.88
LDB1Q86U70 AC137761.2-201ENST00000561729 223 ntBASIC20.52■□□□□ 0.88
LDB1Q86U70 AC145350.3-201ENST00000569033 163 ntBASIC20.52■□□□□ 0.88
LDB1Q86U70 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LDB1Q86U70 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.52■□□□□ 0.88
LDB1Q86U70 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.52■□□□□ 0.88
LDB1Q86U70 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LDB1Q86U70 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
LDB1Q86U70 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.52■□□□□ 0.87
LDB1Q86U70 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.52■□□□□ 0.87
LDB1Q86U70 AC027702.1-201ENST00000563810 1770 ntBASIC20.51■□□□□ 0.87
LDB1Q86U70 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.51■□□□□ 0.87
LDB1Q86U70 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LDB1Q86U70 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LDB1Q86U70 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LDB1Q86U70 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
LDB1Q86U70 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LDB1Q86U70 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.51■□□□□ 0.87
LDB1Q86U70 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.51■□□□□ 0.87
LDB1Q86U70 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LDB1Q86U70 AC091799.1-201ENST00000422823 811 ntBASIC20.51■□□□□ 0.87
LDB1Q86U70 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.51■□□□□ 0.87
LDB1Q86U70 SLC7A5P1-201ENST00000568957 537 ntBASIC20.51■□□□□ 0.87
LDB1Q86U70 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LDB1Q86U70 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LDB1Q86U70 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
LDB1Q86U70 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.51■□□□□ 0.87
LDB1Q86U70 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LDB1Q86U70 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LDB1Q86U70 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.51■□□□□ 0.87
LDB1Q86U70 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LDB1Q86U70 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.51■□□□□ 0.87
LDB1Q86U70 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LDB1Q86U70 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LDB1Q86U70 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.51■□□□□ 0.87
LDB1Q86U70 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LDB1Q86U70 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LDB1Q86U70 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LDB1Q86U70 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LDB1Q86U70 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LDB1Q86U70 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LDB1Q86U70 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LDB1Q86U70 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LDB1Q86U70 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LDB1Q86U70 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LDB1Q86U70 AL121603.2-201ENST00000557373 2117 ntBASIC20.5■□□□□ 0.87
LDB1Q86U70 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LDB1Q86U70 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LDB1Q86U70 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.5■□□□□ 0.87
LDB1Q86U70 MIR5787-201ENST00000611784 55 ntBASIC20.5■□□□□ 0.87
LDB1Q86U70 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.5■□□□□ 0.87
LDB1Q86U70 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LDB1Q86U70 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.5■□□□□ 0.87
LDB1Q86U70 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LDB1Q86U70 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LDB1Q86U70 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.49■□□□□ 0.87
LDB1Q86U70 AC116050.2-201ENST00000612102 1779 ntBASIC20.49■□□□□ 0.87
LDB1Q86U70 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LDB1Q86U70 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.49■□□□□ 0.87
LDB1Q86U70 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LDB1Q86U70 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LDB1Q86U70 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.49■□□□□ 0.87
LDB1Q86U70 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LDB1Q86U70 MIR935-201ENST00000401179 91 ntBASIC20.49■□□□□ 0.87
LDB1Q86U70 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.49■□□□□ 0.87
LDB1Q86U70 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.49■□□□□ 0.87
LDB1Q86U70 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.49■□□□□ 0.87
LDB1Q86U70 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LDB1Q86U70 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.49■□□□□ 0.87
LDB1Q86U70 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LDB1Q86U70 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LDB1Q86U70 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LDB1Q86U70 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LDB1Q86U70 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LDB1Q86U70 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
LDB1Q86U70 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.49■□□□□ 0.87
LDB1Q86U70 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LDB1Q86U70 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms