Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AF106564.1-201ENST00000607058 2553 ntBASIC19.22■□□□□ 0.67
RTL4Q6ZR62 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.22■□□□□ 0.67
RTL4Q6ZR62 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.22■□□□□ 0.67
RTL4Q6ZR62 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RTL4Q6ZR62 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL4Q6ZR62 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL4Q6ZR62 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RTL4Q6ZR62 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.21■□□□□ 0.67
RTL4Q6ZR62 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL4Q6ZR62 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.21■□□□□ 0.67
RTL4Q6ZR62 AC243732.1-201ENST00000612648 864 ntBASIC19.21■□□□□ 0.67
RTL4Q6ZR62 RBM17P2-201ENST00000616397 1405 ntBASIC19.21■□□□□ 0.67
RTL4Q6ZR62 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.21■□□□□ 0.67
RTL4Q6ZR62 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.21■□□□□ 0.67
RTL4Q6ZR62 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL4Q6ZR62 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL4Q6ZR62 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.2■□□□□ 0.66
RTL4Q6ZR62 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.2■□□□□ 0.66
RTL4Q6ZR62 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RTL4Q6ZR62 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL4Q6ZR62 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.2■□□□□ 0.66
RTL4Q6ZR62 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL4Q6ZR62 GPX1P1-201ENST00000388829 606 ntBASIC19.2■□□□□ 0.66
RTL4Q6ZR62 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTL4Q6ZR62 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.2■□□□□ 0.66
RTL4Q6ZR62 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.2■□□□□ 0.66
RTL4Q6ZR62 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.2■□□□□ 0.66
RTL4Q6ZR62 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL4Q6ZR62 AL121832.2-201ENST00000610979 668 ntBASIC19.2■□□□□ 0.66
RTL4Q6ZR62 AL050303.2-201ENST00000619798 666 ntBASIC19.2■□□□□ 0.66
RTL4Q6ZR62 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL4Q6ZR62 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.2■□□□□ 0.66
RTL4Q6ZR62 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTL4Q6ZR62 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL4Q6ZR62 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
RTL4Q6ZR62 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTL4Q6ZR62 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RTL4Q6ZR62 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
RTL4Q6ZR62 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTL4Q6ZR62 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTL4Q6ZR62 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTL4Q6ZR62 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTL4Q6ZR62 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.19■□□□□ 0.66
RTL4Q6ZR62 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.19■□□□□ 0.66
RTL4Q6ZR62 AL109923.1-201ENST00000618799 583 ntBASIC19.19■□□□□ 0.66
RTL4Q6ZR62 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RTL4Q6ZR62 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTL4Q6ZR62 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTL4Q6ZR62 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RTL4Q6ZR62 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTL4Q6ZR62 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTL4Q6ZR62 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.19■□□□□ 0.66
RTL4Q6ZR62 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTL4Q6ZR62 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTL4Q6ZR62 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTL4Q6ZR62 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTL4Q6ZR62 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL4Q6ZR62 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.18■□□□□ 0.66
RTL4Q6ZR62 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RTL4Q6ZR62 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTL4Q6ZR62 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
RTL4Q6ZR62 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL4Q6ZR62 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL4Q6ZR62 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL4Q6ZR62 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL4Q6ZR62 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.18■□□□□ 0.66
RTL4Q6ZR62 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
RTL4Q6ZR62 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.18■□□□□ 0.66
RTL4Q6ZR62 AC245052.3-201ENST00000450182 901 ntBASIC19.18■□□□□ 0.66
RTL4Q6ZR62 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTL4Q6ZR62 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
RTL4Q6ZR62 AC104771.1-201ENST00000603335 964 ntBASIC19.18■□□□□ 0.66
RTL4Q6ZR62 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL4Q6ZR62 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL4Q6ZR62 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTL4Q6ZR62 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RTL4Q6ZR62 AC092667.1-201ENST00000434301 2586 ntBASIC19.18■□□□□ 0.66
RTL4Q6ZR62 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms