Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RC3H1Q5TC82 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RC3H1Q5TC82 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
RC3H1Q5TC82 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
RC3H1Q5TC82 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC26.19■■□□□ 1.78
RC3H1Q5TC82 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC26.19■■□□□ 1.78
RC3H1Q5TC82 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC26.19■■□□□ 1.78
RC3H1Q5TC82 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
RC3H1Q5TC82 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC26.19■■□□□ 1.78
RC3H1Q5TC82 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RC3H1Q5TC82 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
RC3H1Q5TC82 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC26.19■■□□□ 1.78
RC3H1Q5TC82 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RC3H1Q5TC82 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RC3H1Q5TC82 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RC3H1Q5TC82 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC26.18■■□□□ 1.78
RC3H1Q5TC82 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
RC3H1Q5TC82 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RC3H1Q5TC82 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC26.18■■□□□ 1.78
RC3H1Q5TC82 PGM5P4-201ENST00000421970 445 ntBASIC26.18■■□□□ 1.78
RC3H1Q5TC82 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
RC3H1Q5TC82 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC26.18■■□□□ 1.78
RC3H1Q5TC82 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC26.18■■□□□ 1.78
RC3H1Q5TC82 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RC3H1Q5TC82 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RC3H1Q5TC82 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC26.18■■□□□ 1.78
RC3H1Q5TC82 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.18■■□□□ 1.78
RC3H1Q5TC82 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC26.17■■□□□ 1.78
RC3H1Q5TC82 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RC3H1Q5TC82 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
RC3H1Q5TC82 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
RC3H1Q5TC82 PRKY-204ENST00000533551 1019 ntBASIC26.17■■□□□ 1.78
RC3H1Q5TC82 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC26.17■■□□□ 1.78
RC3H1Q5TC82 AL355075.4-201ENST00000554988 638 ntBASIC26.17■■□□□ 1.78
RC3H1Q5TC82 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC26.17■■□□□ 1.78
RC3H1Q5TC82 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC26.17■■□□□ 1.78
RC3H1Q5TC82 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC26.17■■□□□ 1.78
RC3H1Q5TC82 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
RC3H1Q5TC82 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
RC3H1Q5TC82 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC26.17■■□□□ 1.78
RC3H1Q5TC82 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC26.17■■□□□ 1.78
RC3H1Q5TC82 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC26.17■■□□□ 1.78
RC3H1Q5TC82 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RC3H1Q5TC82 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC26.16■■□□□ 1.78
RC3H1Q5TC82 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.16■■□□□ 1.78
RC3H1Q5TC82 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC26.16■■□□□ 1.78
RC3H1Q5TC82 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC26.16■■□□□ 1.78
RC3H1Q5TC82 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RC3H1Q5TC82 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
RC3H1Q5TC82 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC26.16■■□□□ 1.78
RC3H1Q5TC82 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
RC3H1Q5TC82 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
RC3H1Q5TC82 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RC3H1Q5TC82 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.16■■□□□ 1.78
RC3H1Q5TC82 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RC3H1Q5TC82 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC26.16■■□□□ 1.78
RC3H1Q5TC82 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RC3H1Q5TC82 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RC3H1Q5TC82 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC26.16■■□□□ 1.78
RC3H1Q5TC82 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC26.15■■□□□ 1.78
RC3H1Q5TC82 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RC3H1Q5TC82 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.15■■□□□ 1.78
RC3H1Q5TC82 MOK-233ENST00000524214 1539 ntTSL 2 BASIC26.15■■□□□ 1.78
RC3H1Q5TC82 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RC3H1Q5TC82 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RC3H1Q5TC82 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC26.15■■□□□ 1.78
RC3H1Q5TC82 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC26.15■■□□□ 1.78
RC3H1Q5TC82 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RC3H1Q5TC82 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC26.15■■□□□ 1.78
RC3H1Q5TC82 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RC3H1Q5TC82 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RC3H1Q5TC82 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RC3H1Q5TC82 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC26.14■■□□□ 1.78
RC3H1Q5TC82 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RC3H1Q5TC82 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
RC3H1Q5TC82 RER1-204ENST00000378518 522 ntTSL 3 BASIC26.14■■□□□ 1.78
RC3H1Q5TC82 RCN1P1-201ENST00000400413 996 ntBASIC26.14■■□□□ 1.78
RC3H1Q5TC82 TK2-213ENST00000563369 882 ntTSL 5 BASIC26.14■■□□□ 1.78
RC3H1Q5TC82 CABP2-204ENST00000636477 941 ntTSL 5 BASIC26.14■■□□□ 1.78
RC3H1Q5TC82 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
RC3H1Q5TC82 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RC3H1Q5TC82 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
RC3H1Q5TC82 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
RC3H1Q5TC82 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
RC3H1Q5TC82 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
RC3H1Q5TC82 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RC3H1Q5TC82 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
RC3H1Q5TC82 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
RC3H1Q5TC82 AL390719.1-204ENST00000412397 1219 ntBASIC26.13■■□□□ 1.77
RC3H1Q5TC82 PENK-204ENST00000518770 863 ntTSL 2 BASIC26.13■■□□□ 1.77
RC3H1Q5TC82 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC26.13■■□□□ 1.77
RC3H1Q5TC82 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC26.13■■□□□ 1.77
RC3H1Q5TC82 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC26.13■■□□□ 1.77
RC3H1Q5TC82 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC26.13■■□□□ 1.77
RC3H1Q5TC82 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
RC3H1Q5TC82 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RC3H1Q5TC82 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.12■■□□□ 1.77
RC3H1Q5TC82 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC26.12■■□□□ 1.77
RC3H1Q5TC82 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RC3H1Q5TC82 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms