Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.69■■□□□ 1.06
PTPN20Q4JDL3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.68■■□□□ 1.06
PTPN20Q4JDL3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PTPN20Q4JDL3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PTPN20Q4JDL3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTPN20Q4JDL3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PTPN20Q4JDL3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTPN20Q4JDL3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PTPN20Q4JDL3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PTPN20Q4JDL3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.68■■□□□ 1.06
PTPN20Q4JDL3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PTPN20Q4JDL3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PTPN20Q4JDL3 AL137784.2-201ENST00000607332 1000 ntBASIC21.68■■□□□ 1.06
PTPN20Q4JDL3 AC068338.2-201ENST00000563278 1430 ntBASIC21.68■■□□□ 1.06
PTPN20Q4JDL3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTPN20Q4JDL3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTPN20Q4JDL3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PTPN20Q4JDL3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPN20Q4JDL3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PTPN20Q4JDL3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.67■■□□□ 1.06
PTPN20Q4JDL3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPN20Q4JDL3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPN20Q4JDL3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPN20Q4JDL3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.67■■□□□ 1.06
PTPN20Q4JDL3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.67■■□□□ 1.06
PTPN20Q4JDL3 CDV3P1-201ENST00000471403 739 ntBASIC21.67■■□□□ 1.06
PTPN20Q4JDL3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.67■■□□□ 1.06
PTPN20Q4JDL3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.67■■□□□ 1.06
PTPN20Q4JDL3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPN20Q4JDL3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTPN20Q4JDL3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
PTPN20Q4JDL3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTPN20Q4JDL3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
PTPN20Q4JDL3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.66■■□□□ 1.06
PTPN20Q4JDL3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.66■■□□□ 1.06
PTPN20Q4JDL3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.66■■□□□ 1.06
PTPN20Q4JDL3 AL121603.2-201ENST00000557373 2117 ntBASIC21.66■■□□□ 1.06
PTPN20Q4JDL3 FEM1AP1-201ENST00000431297 1995 ntBASIC21.66■■□□□ 1.06
PTPN20Q4JDL3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PTPN20Q4JDL3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTPN20Q4JDL3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PTPN20Q4JDL3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PTPN20Q4JDL3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 AL162412.1-201ENST00000567129 965 ntBASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 FAM21FP-204ENST00000608637 956 ntBASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 AC080038.1-201ENST00000611274 1154 ntBASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN20Q4JDL3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PTPN20Q4JDL3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PTPN20Q4JDL3 AC073314.1-201ENST00000568729 2216 ntBASIC21.64■■□□□ 1.06
PTPN20Q4JDL3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.64■■□□□ 1.06
PTPN20Q4JDL3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.64■■□□□ 1.05
PTPN20Q4JDL3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.64■■□□□ 1.05
PTPN20Q4JDL3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN20Q4JDL3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.64■■□□□ 1.05
PTPN20Q4JDL3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.64■■□□□ 1.05
PTPN20Q4JDL3 AC231657.2-201ENST00000624556 255 ntBASIC21.64■■□□□ 1.05
PTPN20Q4JDL3 AC073111.5-205ENST00000641717 521 ntBASIC21.64■■□□□ 1.05
PTPN20Q4JDL3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN20Q4JDL3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN20Q4JDL3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN20Q4JDL3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN20Q4JDL3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
PTPN20Q4JDL3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PTPN20Q4JDL3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN20Q4JDL3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN20Q4JDL3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN20Q4JDL3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PTPN20Q4JDL3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN20Q4JDL3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN20Q4JDL3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PTPN20Q4JDL3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN20Q4JDL3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PTPN20Q4JDL3 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.63■■□□□ 1.05
PTPN20Q4JDL3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms