Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.15■□□□□ 0.5
PCGF3Q3KNV8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.15■□□□□ 0.5
PCGF3Q3KNV8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCGF3Q3KNV8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCGF3Q3KNV8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.15■□□□□ 0.5
PCGF3Q3KNV8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PCGF3Q3KNV8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCGF3Q3KNV8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCGF3Q3KNV8 AC004854.2-201ENST00000608450 1441 ntBASIC18.15■□□□□ 0.5
PCGF3Q3KNV8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCGF3Q3KNV8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCGF3Q3KNV8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCGF3Q3KNV8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.14■□□□□ 0.5
PCGF3Q3KNV8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PCGF3Q3KNV8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.14■□□□□ 0.5
PCGF3Q3KNV8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCGF3Q3KNV8 AP006587.3-201ENST00000525742 1516 ntBASIC18.14■□□□□ 0.49
PCGF3Q3KNV8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.14■□□□□ 0.49
PCGF3Q3KNV8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCGF3Q3KNV8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCGF3Q3KNV8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.14■□□□□ 0.49
PCGF3Q3KNV8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.14■□□□□ 0.49
PCGF3Q3KNV8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCGF3Q3KNV8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
PCGF3Q3KNV8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCGF3Q3KNV8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.14■□□□□ 0.49
PCGF3Q3KNV8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.14■□□□□ 0.49
PCGF3Q3KNV8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.14■□□□□ 0.49
PCGF3Q3KNV8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCGF3Q3KNV8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCGF3Q3KNV8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.13■□□□□ 0.49
PCGF3Q3KNV8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
PCGF3Q3KNV8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCGF3Q3KNV8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.12■□□□□ 0.49
PCGF3Q3KNV8 AL049796.1-201ENST00000565336 1766 ntBASIC18.12■□□□□ 0.49
PCGF3Q3KNV8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.12■□□□□ 0.49
PCGF3Q3KNV8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCGF3Q3KNV8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
PCGF3Q3KNV8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.12■□□□□ 0.49
PCGF3Q3KNV8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCGF3Q3KNV8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PCGF3Q3KNV8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.12■□□□□ 0.49
PCGF3Q3KNV8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.12■□□□□ 0.49
PCGF3Q3KNV8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCGF3Q3KNV8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.12■□□□□ 0.49
PCGF3Q3KNV8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.12■□□□□ 0.49
PCGF3Q3KNV8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.11■□□□□ 0.49
PCGF3Q3KNV8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCGF3Q3KNV8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.11■□□□□ 0.49
PCGF3Q3KNV8 AC016769.1-201ENST00000409132 1010 ntBASIC18.11■□□□□ 0.49
PCGF3Q3KNV8 AC137761.2-201ENST00000561729 223 ntBASIC18.11■□□□□ 0.49
PCGF3Q3KNV8 AC145350.3-201ENST00000569033 163 ntBASIC18.11■□□□□ 0.49
PCGF3Q3KNV8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.11■□□□□ 0.49
PCGF3Q3KNV8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCGF3Q3KNV8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PCGF3Q3KNV8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PCGF3Q3KNV8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCGF3Q3KNV8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.11■□□□□ 0.49
PCGF3Q3KNV8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCGF3Q3KNV8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.11■□□□□ 0.49
PCGF3Q3KNV8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.11■□□□□ 0.49
PCGF3Q3KNV8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PCGF3Q3KNV8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCGF3Q3KNV8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PCGF3Q3KNV8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCGF3Q3KNV8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCGF3Q3KNV8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCGF3Q3KNV8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCGF3Q3KNV8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCGF3Q3KNV8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCGF3Q3KNV8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCGF3Q3KNV8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.1■□□□□ 0.49
PCGF3Q3KNV8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PCGF3Q3KNV8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCGF3Q3KNV8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.1■□□□□ 0.49
PCGF3Q3KNV8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCGF3Q3KNV8 KRT18P11-201ENST00000435214 1283 ntBASIC18.1■□□□□ 0.49
PCGF3Q3KNV8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
PCGF3Q3KNV8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms