Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 KRT18P29-201ENST00000397031 1267 ntBASIC24.82■■□□□ 1.56
PDS5AQ29RF7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
PDS5AQ29RF7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PDS5AQ29RF7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC24.82■■□□□ 1.56
PDS5AQ29RF7 AC008403.3-201ENST00000598924 454 ntBASIC24.82■■□□□ 1.56
PDS5AQ29RF7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.82■■□□□ 1.56
PDS5AQ29RF7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
PDS5AQ29RF7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PDS5AQ29RF7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC24.81■■□□□ 1.56
PDS5AQ29RF7 FBXW4P1-201ENST00000426721 2239 ntBASIC24.81■■□□□ 1.56
PDS5AQ29RF7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PDS5AQ29RF7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.81■■□□□ 1.56
PDS5AQ29RF7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PDS5AQ29RF7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PDS5AQ29RF7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
PDS5AQ29RF7 AC008687.6-201ENST00000596318 630 ntBASIC24.81■■□□□ 1.56
PDS5AQ29RF7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
PDS5AQ29RF7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PDS5AQ29RF7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PDS5AQ29RF7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PDS5AQ29RF7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PDS5AQ29RF7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
PDS5AQ29RF7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PDS5AQ29RF7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PDS5AQ29RF7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC24.8■■□□□ 1.56
PDS5AQ29RF7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.8■■□□□ 1.56
PDS5AQ29RF7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.8■■□□□ 1.56
PDS5AQ29RF7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PDS5AQ29RF7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.79■■□□□ 1.56
PDS5AQ29RF7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PDS5AQ29RF7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
PDS5AQ29RF7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.79■■□□□ 1.56
PDS5AQ29RF7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PDS5AQ29RF7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PDS5AQ29RF7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC24.79■■□□□ 1.56
PDS5AQ29RF7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PDS5AQ29RF7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PDS5AQ29RF7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC24.79■■□□□ 1.56
PDS5AQ29RF7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC24.79■■□□□ 1.56
PDS5AQ29RF7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PDS5AQ29RF7 SLC29A4P2-201ENST00000504749 1089 ntBASIC24.79■■□□□ 1.56
PDS5AQ29RF7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC24.79■■□□□ 1.56
PDS5AQ29RF7 AC092368.3-202ENST00000574180 1591 ntBASIC24.79■■□□□ 1.56
PDS5AQ29RF7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC24.79■■□□□ 1.56
PDS5AQ29RF7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PDS5AQ29RF7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PDS5AQ29RF7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PDS5AQ29RF7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
PDS5AQ29RF7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PDS5AQ29RF7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PDS5AQ29RF7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PDS5AQ29RF7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC24.78■■□□□ 1.56
PDS5AQ29RF7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PDS5AQ29RF7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PDS5AQ29RF7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
PDS5AQ29RF7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PDS5AQ29RF7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.78■■□□□ 1.56
PDS5AQ29RF7 AL049796.1-201ENST00000565336 1766 ntBASIC24.77■■□□□ 1.56
PDS5AQ29RF7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PDS5AQ29RF7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.77■■□□□ 1.56
PDS5AQ29RF7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
PDS5AQ29RF7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC24.77■■□□□ 1.56
PDS5AQ29RF7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
PDS5AQ29RF7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PDS5AQ29RF7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PDS5AQ29RF7 AC006058.3-201ENST00000606217 1069 ntBASIC24.77■■□□□ 1.56
PDS5AQ29RF7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PDS5AQ29RF7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PDS5AQ29RF7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PDS5AQ29RF7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
PDS5AQ29RF7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.76■■□□□ 1.55
PDS5AQ29RF7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PDS5AQ29RF7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PDS5AQ29RF7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC24.76■■□□□ 1.55
PDS5AQ29RF7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC24.76■■□□□ 1.55
PDS5AQ29RF7 AC128676.1-201ENST00000454392 318 ntBASIC24.76■■□□□ 1.55
PDS5AQ29RF7 AC098590.1-201ENST00000468126 897 ntBASIC24.76■■□□□ 1.55
PDS5AQ29RF7 UNC93B4-201ENST00000505679 747 ntBASIC24.76■■□□□ 1.55
PDS5AQ29RF7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC24.76■■□□□ 1.55
PDS5AQ29RF7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC24.76■■□□□ 1.55
PDS5AQ29RF7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC24.76■■□□□ 1.55
PDS5AQ29RF7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC24.76■■□□□ 1.55
PDS5AQ29RF7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC24.76■■□□□ 1.55
PDS5AQ29RF7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PDS5AQ29RF7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDS5AQ29RF7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDS5AQ29RF7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDS5AQ29RF7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
PDS5AQ29RF7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PDS5AQ29RF7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC24.75■■□□□ 1.55
PDS5AQ29RF7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PDS5AQ29RF7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
PDS5AQ29RF7 AC027702.1-201ENST00000563810 1770 ntBASIC24.75■■□□□ 1.55
PDS5AQ29RF7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDS5AQ29RF7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDS5AQ29RF7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDS5AQ29RF7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDS5AQ29RF7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC24.75■■□□□ 1.55
PDS5AQ29RF7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC24.75■■□□□ 1.55
PDS5AQ29RF7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms