Protein–RNA interactions for Protein: Q12391

TY1A-NL1, Transposon Ty1-NL1 Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-NL1Q12391 YOR302WYOR302W 78 nt3.83□□□□□ -1.8
TY1A-NL1Q12391 MF(ALPHA)1YPL187W 498 nt3.83□□□□□ -1.8
TY1A-NL1Q12391 NHX1YDR456W 1902 nt3.83□□□□□ -1.8
TY1A-NL1Q12391 ELM1YKL048C 1923 nt3.83□□□□□ -1.8
TY1A-NL1Q12391 CHL1YPL008W 2586 nt3.82□□□□□ -1.8
TY1A-NL1Q12391 SHQ1YIL104C 1524 nt3.82□□□□□ -1.8
TY1A-NL1Q12391 GPG1YGL121C 381 nt3.82□□□□□ -1.8
TY1A-NL1Q12391 COX18YGR062C 951 nt3.82□□□□□ -1.8
TY1A-NL1Q12391 YOR072W-AYOR072W-A 249 nt3.82□□□□□ -1.8
TY1A-NL1Q12391 MES1YGR264C 2256 nt3.82□□□□□ -1.8
TY1A-NL1Q12391 PRM15YMR278W 1869 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 RTC1YOL138C 4026 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 YHR078WYHR078W 1659 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 ALO1YML086C 1581 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 MNN4YKL201C 3537 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 PTA1YAL043C 2358 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 ADP1YCR011C 3150 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 CSN9YDR179C 489 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 FRQ1YDR373W 573 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 MZM1YDR493W 372 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 YEL014CYEL014C 306 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 YIL032CYIL032C 357 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 RDN5-1RDN5-1 121 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 RDN5-6RDN5-6 121 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 NKP2YLR315W 462 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 RPS22BYLR367W 393 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 AIP1YMR092C 1848 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 HBT1YDL223C 3141 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 COX1Q0045 1605 nt3.81□□□□□ -1.8
TY1A-NL1Q12391 ARG5,6YER069W 2592 nt3.8□□□□□ -1.8
TY1A-NL1Q12391 BUD5YCR038C 1929 nt3.8□□□□□ -1.8
TY1A-NL1Q12391 RAD1YPL022W 3303 nt3.8□□□□□ -1.8
TY1A-NL1Q12391 RPL14BYHL001W 417 nt3.8□□□□□ -1.8
TY1A-NL1Q12391 RPL14AYKL006W 417 nt3.8□□□□□ -1.8
TY1A-NL1Q12391 YBL083CYBL083C 426 nt3.8□□□□□ -1.8
TY1A-NL1Q12391 GAL11YOL051W 3246 nt3.8□□□□□ -1.8
TY1A-NL1Q12391 NAN1YPL126W 2691 nt3.8□□□□□ -1.8
TY1A-NL1Q12391 VPS41YDR080W 2979 nt3.8□□□□□ -1.8
TY1A-NL1Q12391 GDH2YDL215C 3279 nt3.8□□□□□ -1.8
TY1A-NL1Q12391 COG8YML071C 1824 nt3.79□□□□□ -1.8
TY1A-NL1Q12391 TRS85YDR108W 2097 nt3.79□□□□□ -1.8
TY1A-NL1Q12391 FLO8YER109C 2400 nt3.79□□□□□ -1.8
TY1A-NL1Q12391 VHS3YOR054C 2025 nt3.79□□□□□ -1.8
TY1A-NL1Q12391 YDL011CYDL011C 324 nt3.79□□□□□ -1.8
TY1A-NL1Q12391 PAU13YHL046C 363 nt3.79□□□□□ -1.8
TY1A-NL1Q12391 YIL102CYIL102C 306 nt3.79□□□□□ -1.8
TY1A-NL1Q12391 AYR1YIL124W 894 nt3.79□□□□□ -1.8
TY1A-NL1Q12391 COF1YLL050C 432 nt3.79□□□□□ -1.8
TY1A-NL1Q12391 HTB2YBL002W 396 nt3.79□□□□□ -1.8
TY1A-NL1Q12391 ALY1YKR021W 2748 nt3.79□□□□□ -1.8
TY1A-NL1Q12391 VIP1YLR410W 3441 nt3.79□□□□□ -1.8
TY1A-NL1Q12391 CWH41YGL027C 2502 nt3.79□□□□□ -1.8
TY1A-NL1Q12391 NUP60YAR002W 1620 nt3.78□□□□□ -1.8
TY1A-NL1Q12391 VID28YIL017C 2766 nt3.78□□□□□ -1.8
TY1A-NL1Q12391 RPS18AYDR450W 441 nt3.78□□□□□ -1.8
TY1A-NL1Q12391 YHL042WYHL042W 453 nt3.78□□□□□ -1.8
TY1A-NL1Q12391 PAU23YLR037C 375 nt3.78□□□□□ -1.8
TY1A-NL1Q12391 PHM7YOL084W 2976 nt3.78□□□□□ -1.8
TY1A-NL1Q12391 REV1YOR346W 2958 nt3.78□□□□□ -1.8
TY1A-NL1Q12391 PDR5YOR153W 4536 nt3.78□□□□□ -1.81
TY1A-NL1Q12391 PIM1YBL022C 3402 nt3.77□□□□□ -1.81
TY1A-NL1Q12391 MNL1YHR204W 2391 nt3.77□□□□□ -1.81
TY1A-NL1Q12391 VMA1YDL185W 3216 nt3.77□□□□□ -1.81
TY1A-NL1Q12391 IMH1YLR309C 2736 nt3.77□□□□□ -1.81
TY1A-NL1Q12391 RPL36BYPL249C-A 303 nt3.77□□□□□ -1.81
TY1A-NL1Q12391 PFK1YGR240C 2964 nt3.77□□□□□ -1.81
TY1A-NL1Q12391 ATG2YNL242W 4779 nt3.76□□□□□ -1.81
TY1A-NL1Q12391 BFA1YJR053W 1725 nt3.76□□□□□ -1.81
TY1A-NL1Q12391 YLR140WYLR140W 327 nt3.76□□□□□ -1.81
TY1A-NL1Q12391 NAT1YDL040C 2565 nt3.76□□□□□ -1.81
TY1A-NL1Q12391 YSH1YLR277C 2340 nt3.76□□□□□ -1.81
TY1A-NL1Q12391 RIM20YOR275C 1986 nt3.75□□□□□ -1.81
TY1A-NL1Q12391 RPS24AYER074W 408 nt3.75□□□□□ -1.81
TY1A-NL1Q12391 SRP72YPL210C 1923 nt3.75□□□□□ -1.81
TY1A-NL1Q12391 KIN4YOR233W 2403 nt3.75□□□□□ -1.81
TY1A-NL1Q12391 GCR1YPL075W 2358 nt3.75□□□□□ -1.81
TY1A-NL1Q12391 ULS1YOR191W 4860 nt3.75□□□□□ -1.81
TY1A-NL1Q12391 ISM1YPL040C 3009 nt3.74□□□□□ -1.81
TY1A-NL1Q12391 YER077CYER077C 2067 nt3.74□□□□□ -1.81
TY1A-NL1Q12391 PAU2YEL049W 363 nt3.74□□□□□ -1.81
TY1A-NL1Q12391 YER189WYER189W 369 nt3.74□□□□□ -1.81
TY1A-NL1Q12391 tT(UGU)Q1tT(UGU)Q1 76 nt3.74□□□□□ -1.81
TY1A-NL1Q12391 YKR033CYKR033C 426 nt3.74□□□□□ -1.81
TY1A-NL1Q12391 MGR2YPL098C 342 nt3.74□□□□□ -1.81
TY1A-NL1Q12391 APC1YNL172W 5247 nt3.74□□□□□ -1.81
TY1A-NL1Q12391 FMP46YKR049C 402 nt3.73□□□□□ -1.81
TY1A-NL1Q12391 ALG8YOR067C 1734 nt3.73□□□□□ -1.81
TY1A-NL1Q12391 ECM22YLR228C 2445 nt3.72□□□□□ -1.81
TY1A-NL1Q12391 CCT7YJL111W 1653 nt3.72□□□□□ -1.81
TY1A-NL1Q12391 SRO7YPR032W 3102 nt3.72□□□□□ -1.81
TY1A-NL1Q12391 ECM16YMR128W 3804 nt3.72□□□□□ -1.81
TY1A-NL1Q12391 FRE8YLR047C 2061 nt3.71□□□□□ -1.82
TY1A-NL1Q12391 TIM8YJR135W-A 264 nt3.71□□□□□ -1.82
TY1A-NL1Q12391 SHH3YMR118C 591 nt3.71□□□□□ -1.82
TY1A-NL1Q12391 YMR172C-AYMR172C-A 384 nt3.71□□□□□ -1.82
TY1A-NL1Q12391 PEX11YOL147C 711 nt3.71□□□□□ -1.82
TY1A-NL1Q12391 SWD3YBR175W 948 nt3.71□□□□□ -1.82
TY1A-NL1Q12391 ECM25YJL201W 1800 nt3.71□□□□□ -1.82
TY1A-NL1Q12391 NCR1YPL006W 3513 nt3.7□□□□□ -1.82
TY1A-NL1Q12391 SSH4YKL124W 1740 nt3.7□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 41.5 ms