Protein–RNA interactions for Protein: Q06623

HDA3, HDA1 complex subunit 3, yeastyeast

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA3Q06623 CWC22YGR278W 1734 nt4.28□□□□□ -1.72
HDA3Q06623 YHR078WYHR078W 1659 nt4.28□□□□□ -1.72
HDA3Q06623 YJL016WYJL016W 1686 nt4.28□□□□□ -1.72
HDA3Q06623 SGO1YOR073W 1773 nt4.27□□□□□ -1.73
HDA3Q06623 RAD61YDR014W 1944 nt4.27□□□□□ -1.73
HDA3Q06623 RPG1YBR079C 2895 nt4.27□□□□□ -1.73
HDA3Q06623 NAN1YPL126W 2691 nt4.27□□□□□ -1.73
HDA3Q06623 YDL185C-AYDL185C-A 228 nt4.27□□□□□ -1.73
HDA3Q06623 SDH6YDR379C-A 240 nt4.27□□□□□ -1.73
HDA3Q06623 RPL40AYIL148W 387 nt4.27□□□□□ -1.73
HDA3Q06623 YLR342W-AYLR342W-A 174 nt4.27□□□□□ -1.73
HDA3Q06623 SWC7YLR385C 399 nt4.27□□□□□ -1.73
HDA3Q06623 VPS41YDR080W 2979 nt4.27□□□□□ -1.73
HDA3Q06623 NRP1YDL167C 2160 nt4.27□□□□□ -1.73
HDA3Q06623 RED1YLR263W 2484 nt4.27□□□□□ -1.73
HDA3Q06623 VPS73YGL104C 1461 nt4.26□□□□□ -1.73
HDA3Q06623 YGR174W-AYGR174W-A 87 nt4.26□□□□□ -1.73
HDA3Q06623 RPL14BYHL001W 417 nt4.26□□□□□ -1.73
HDA3Q06623 FAA1YOR317W 2103 nt4.26□□□□□ -1.73
HDA3Q06623 IZH3YLR023C 1632 nt4.25□□□□□ -1.73
HDA3Q06623 TSA2YDR453C 591 nt4.25□□□□□ -1.73
HDA3Q06623 YLR364C-AYLR364C-A 123 nt4.25□□□□□ -1.73
HDA3Q06623 RPL23AYBL087C 414 nt4.25□□□□□ -1.73
HDA3Q06623 ESF2YNR054C 951 nt4.25□□□□□ -1.73
HDA3Q06623 YPL025CYPL025C 558 nt4.25□□□□□ -1.73
HDA3Q06623 YBR064WYBR064W 429 nt4.25□□□□□ -1.73
HDA3Q06623 JHD2YJR119C 2187 nt4.24□□□□□ -1.73
HDA3Q06623 NKP2YLR315W 462 nt4.24□□□□□ -1.73
HDA3Q06623 YOR072W-AYOR072W-A 249 nt4.24□□□□□ -1.73
HDA3Q06623 CDC15YAR019C 2925 nt4.24□□□□□ -1.73
HDA3Q06623 FAA2YER015W 2235 nt4.23□□□□□ -1.73
HDA3Q06623 REV1YOR346W 2958 nt4.23□□□□□ -1.73
HDA3Q06623 VID28YIL017C 2766 nt4.23□□□□□ -1.73
HDA3Q06623 YOL075CYOL075C 3885 nt4.23□□□□□ -1.73
HDA3Q06623 YDR089WYDR089W 2610 nt4.23□□□□□ -1.73
HDA3Q06623 tQ(UUG)CtQ(UUG)C 72 nt4.23□□□□□ -1.73
HDA3Q06623 tQ(UUG)D1tQ(UUG)D1 72 nt4.23□□□□□ -1.73
HDA3Q06623 tQ(UUG)D2tQ(UUG)D2 72 nt4.23□□□□□ -1.73
HDA3Q06623 tQ(UUG)D3tQ(UUG)D3 72 nt4.23□□□□□ -1.73
HDA3Q06623 tQ(UUG)E1tQ(UUG)E1 72 nt4.23□□□□□ -1.73
HDA3Q06623 tQ(UUG)HtQ(UUG)H 72 nt4.23□□□□□ -1.73
HDA3Q06623 tQ(UUG)LtQ(UUG)L 72 nt4.23□□□□□ -1.73
HDA3Q06623 TIM8YJR135W-A 264 nt4.23□□□□□ -1.73
HDA3Q06623 KIC1YHR102W 3243 nt4.22□□□□□ -1.73
HDA3Q06623 FUS1YCL027W 1539 nt4.22□□□□□ -1.73
HDA3Q06623 FRQ1YDR373W 573 nt4.22□□□□□ -1.73
HDA3Q06623 HSK3YKL138C-A 210 nt4.22□□□□□ -1.73
HDA3Q06623 RFC3YNL290W 1023 nt4.22□□□□□ -1.73
HDA3Q06623 MF(ALPHA)1YPL187W 498 nt4.22□□□□□ -1.73
HDA3Q06623 YBR137WYBR137W 540 nt4.22□□□□□ -1.73
HDA3Q06623 ACE2YLR131C 2313 nt4.22□□□□□ -1.73
HDA3Q06623 YLL032CYLL032C 2478 nt4.21□□□□□ -1.73
HDA3Q06623 SSH4YKL124W 1740 nt4.21□□□□□ -1.73
HDA3Q06623 VAC7YNL054W 3498 nt4.21□□□□□ -1.74
HDA3Q06623 SKG6YHR149C 2205 nt4.21□□□□□ -1.74
HDA3Q06623 snR55snR55 98 nt4.21□□□□□ -1.74
HDA3Q06623 TMA22YJR014W 597 nt4.21□□□□□ -1.74
HDA3Q06623 SRL3YKR091W 741 nt4.21□□□□□ -1.74
HDA3Q06623 DPH6YLR143W 2058 nt4.2□□□□□ -1.74
HDA3Q06623 LCB5YLR260W 2064 nt4.2□□□□□ -1.74
HDA3Q06623 DBP6YNR038W 1890 nt4.2□□□□□ -1.74
HDA3Q06623 CSN9YDR179C 489 nt4.2□□□□□ -1.74
HDA3Q06623 SMT3YDR510W 306 nt4.2□□□□□ -1.74
HDA3Q06623 YIL102CYIL102C 306 nt4.2□□□□□ -1.74
HDA3Q06623 YKR033CYKR033C 426 nt4.2□□□□□ -1.74
HDA3Q06623 HTB2YBL002W 396 nt4.2□□□□□ -1.74
HDA3Q06623 TPS2YDR074W 2691 nt4.2□□□□□ -1.74
HDA3Q06623 SSY1YDR160W 2559 nt4.19□□□□□ -1.74
HDA3Q06623 URB2YJR041C 3525 nt4.19□□□□□ -1.74
HDA3Q06623 SEN1YLR430W 6696 nt4.19□□□□□ -1.74
HDA3Q06623 YDR048CYDR048C 315 nt4.19□□□□□ -1.74
HDA3Q06623 YHL042WYHL042W 453 nt4.19□□□□□ -1.74
HDA3Q06623 FMP46YKR049C 402 nt4.19□□□□□ -1.74
HDA3Q06623 PEX11YOL147C 711 nt4.19□□□□□ -1.74
HDA3Q06623 RPL36BYPL249C-A 303 nt4.19□□□□□ -1.74
HDA3Q06623 GRS2YPR081C 1857 nt4.19□□□□□ -1.74
HDA3Q06623 VPS52YDR484W 1926 nt4.19□□□□□ -1.74
HDA3Q06623 COG8YML071C 1824 nt4.18□□□□□ -1.74
HDA3Q06623 VID27YNL212W 2349 nt4.18□□□□□ -1.74
HDA3Q06623 MUS81YDR386W 1899 nt4.18□□□□□ -1.74
HDA3Q06623 KHA1YJL094C 2622 nt4.18□□□□□ -1.74
HDA3Q06623 GCR1YPL075W 2358 nt4.18□□□□□ -1.74
HDA3Q06623 PMC1YGL006W 3522 nt4.18□□□□□ -1.74
HDA3Q06623 FUN12YAL035W 3009 nt4.18□□□□□ -1.74
HDA3Q06623 MVP1YMR004W 1536 nt4.18□□□□□ -1.74
HDA3Q06623 SPC19YDR201W 498 nt4.18□□□□□ -1.74
HDA3Q06623 RPS24AYER074W 408 nt4.18□□□□□ -1.74
HDA3Q06623 RDN5-1RDN5-1 121 nt4.18□□□□□ -1.74
HDA3Q06623 RDN5-6RDN5-6 121 nt4.18□□□□□ -1.74
HDA3Q06623 YMR194C-AYMR194C-A 225 nt4.18□□□□□ -1.74
HDA3Q06623 HEM4YOR278W 828 nt4.18□□□□□ -1.74
HDA3Q06623 YPL182CYPL182C 384 nt4.18□□□□□ -1.74
HDA3Q06623 YPL278CYPL278C 303 nt4.18□□□□□ -1.74
HDA3Q06623 FLO8YER109C 2400 nt4.18□□□□□ -1.74
HDA3Q06623 PDC2YDR081C 2778 nt4.18□□□□□ -1.74
HDA3Q06623 CAF130YGR134W 3369 nt4.17□□□□□ -1.74
HDA3Q06623 SCW11YGL028C 1629 nt4.17□□□□□ -1.74
HDA3Q06623 YKL050CYKL050C 2769 nt4.17□□□□□ -1.74
HDA3Q06623 ROD1YOR018W 2514 nt4.17□□□□□ -1.74
HDA3Q06623 NPR2YEL062W 1848 nt4.17□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 223.2 ms