Protein–RNA interactions for Protein: Q06236

SHH4, Mitochondrial inner membrane protein SHH4, yeastyeast

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH4Q06236 MUD1YBR119W 897 nt1.42□□□□□ -2.18
SHH4Q06236 LHS1YKL073W 2646 nt1.42□□□□□ -2.18
SHH4Q06236 IRC20YLR247C 4671 nt1.42□□□□□ -2.18
SHH4Q06236 INO80YGL150C 4470 nt1.41□□□□□ -2.18
SHH4Q06236 CDC50YCR094W 1176 nt1.41□□□□□ -2.18
SHH4Q06236 YDR193WYDR193W 399 nt1.41□□□□□ -2.18
SHH4Q06236 YFR032C-BYFR032C-B 264 nt1.41□□□□□ -2.18
SHH4Q06236 GPI14YJR013W 1212 nt1.41□□□□□ -2.18
SHH4Q06236 ADF1YCL058W-A 342 nt1.41□□□□□ -2.18
SHH4Q06236 ECM25YJL201W 1800 nt1.4□□□□□ -2.18
SHH4Q06236 FAB1YFR019W 6837 nt1.4□□□□□ -2.18
SHH4Q06236 PET309YLR067C 2898 nt1.4□□□□□ -2.19
SHH4Q06236 SSQ1YLR369W 1974 nt1.4□□□□□ -2.19
SHH4Q06236 STI1YOR027W 1770 nt1.4□□□□□ -2.19
SHH4Q06236 TFC8YPL007C 1767 nt1.4□□□□□ -2.19
SHH4Q06236 PBP4YDL053C 558 nt1.4□□□□□ -2.19
SHH4Q06236 PRP38YGR075C 729 nt1.4□□□□□ -2.19
SHH4Q06236 VPS25YJR102C 609 nt1.4□□□□□ -2.19
SHH4Q06236 NEJ1YLR265C 1029 nt1.4□□□□□ -2.19
SHH4Q06236 LSM2YBL026W 288 nt1.4□□□□□ -2.19
SHH4Q06236 YMR247W-AYMR247W-A 144 nt1.4□□□□□ -2.19
SHH4Q06236 IRC13YOR235W 315 nt1.4□□□□□ -2.19
SHH4Q06236 PEX34YCL056C 435 nt1.4□□□□□ -2.19
SHH4Q06236 GRR1YJR090C 3456 nt1.4□□□□□ -2.19
SHH4Q06236 PTC5YOR090C 1719 nt1.4□□□□□ -2.19
SHH4Q06236 SBE22YHR103W 2559 nt1.4□□□□□ -2.19
SHH4Q06236 CTF13YMR094W 1437 nt1.4□□□□□ -2.19
SHH4Q06236 RTP1YMR185W 2946 nt1.39□□□□□ -2.19
SHH4Q06236 STE2YFL026W 1296 nt1.39□□□□□ -2.19
SHH4Q06236 tW(CCA)G1tW(CCA)G1 72 nt1.39□□□□□ -2.19
SHH4Q06236 tW(CCA)G2tW(CCA)G2 72 nt1.39□□□□□ -2.19
SHH4Q06236 tW(CCA)JtW(CCA)J 72 nt1.39□□□□□ -2.19
SHH4Q06236 tW(CCA)KtW(CCA)K 72 nt1.39□□□□□ -2.19
SHH4Q06236 tW(CCA)MtW(CCA)M 72 nt1.39□□□□□ -2.19
SHH4Q06236 tW(CCA)PtW(CCA)P 72 nt1.39□□□□□ -2.19
SHH4Q06236 SRP21YKL122C 504 nt1.39□□□□□ -2.19
SHH4Q06236 EMC6YLL014W 327 nt1.39□□□□□ -2.19
SHH4Q06236 DGK1YOR311C 873 nt1.39□□□□□ -2.19
SHH4Q06236 CIN2YPL241C 807 nt1.39□□□□□ -2.19
SHH4Q06236 TAZ1YPR140W 1146 nt1.39□□□□□ -2.19
SHH4Q06236 RXT2YBR095C 1293 nt1.39□□□□□ -2.19
SHH4Q06236 TDA9YML081W 3756 nt1.39□□□□□ -2.19
SHH4Q06236 AHC2YCR082W 387 nt1.38□□□□□ -2.19
SHH4Q06236 RPL31AYDL075W 342 nt1.38□□□□□ -2.19
SHH4Q06236 GPI8YDR331W 1236 nt1.38□□□□□ -2.19
SHH4Q06236 YMR052C-AYMR052C-A 366 nt1.38□□□□□ -2.19
SHH4Q06236 ATG16YMR159C 453 nt1.38□□□□□ -2.19
SHH4Q06236 YMR230W-AYMR230W-A 189 nt1.38□□□□□ -2.19
SHH4Q06236 ARL3YPL051W 597 nt1.38□□□□□ -2.19
SHH4Q06236 SAP190YKR028W 3102 nt1.38□□□□□ -2.19
SHH4Q06236 SSE1YPL106C 2082 nt1.38□□□□□ -2.19
SHH4Q06236 UTP6YDR449C 1323 nt1.38□□□□□ -2.19
SHH4Q06236 SNF12YNR023W 1701 nt1.37□□□□□ -2.19
SHH4Q06236 MGM1YOR211C 2646 nt1.37□□□□□ -2.19
SHH4Q06236 BUB1YGR188C 3066 nt1.37□□□□□ -2.19
SHH4Q06236 TBS1YBR150C 3285 nt1.37□□□□□ -2.19
SHH4Q06236 BTT1YDR252W 450 nt1.37□□□□□ -2.19
SHH4Q06236 YDR262WYDR262W 819 nt1.37□□□□□ -2.19
SHH4Q06236 YDR336WYDR336W 945 nt1.37□□□□□ -2.19
SHH4Q06236 MIC19YFR011C 513 nt1.37□□□□□ -2.19
SHH4Q06236 YGL063C-AYGL063C-A 150 nt1.37□□□□□ -2.19
SHH4Q06236 RFA3YJL173C 369 nt1.37□□□□□ -2.19
SHH4Q06236 NCE101YJL205C 162 nt1.37□□□□□ -2.19
SHH4Q06236 MRPL44YMR225C 297 nt1.37□□□□□ -2.19
SHH4Q06236 YOR331CYOR331C 558 nt1.37□□□□□ -2.19
SHH4Q06236 SHG1YBR258C 429 nt1.37□□□□□ -2.19
SHH4Q06236 YNL034WYNL034W 1839 nt1.37□□□□□ -2.19
SHH4Q06236 PAU3YCR104W 375 nt1.36□□□□□ -2.19
SHH4Q06236 YDR199WYDR199W 366 nt1.36□□□□□ -2.19
SHH4Q06236 YDR286CYDR286C 345 nt1.36□□□□□ -2.19
SHH4Q06236 SYM1YLR251W 594 nt1.36□□□□□ -2.19
SHH4Q06236 HHT2YNL031C 411 nt1.36□□□□□ -2.19
SHH4Q06236 YNR021WYNR021W 1215 nt1.36□□□□□ -2.19
SHH4Q06236 YOL085W-AYOL085W-A 213 nt1.36□□□□□ -2.19
SHH4Q06236 YOR019WYOR019W 2193 nt1.36□□□□□ -2.19
SHH4Q06236 RAD18YCR066W 1464 nt1.36□□□□□ -2.19
SHH4Q06236 YOR343W-BYOR343W-B 5313 nt1.36□□□□□ -2.19
SHH4Q06236 NAN1YPL126W 2691 nt1.35□□□□□ -2.19
SHH4Q06236 YDL062WYDL062W 426 nt1.35□□□□□ -2.19
SHH4Q06236 YDL157CYDL157C 357 nt1.35□□□□□ -2.19
SHH4Q06236 GUK1YDR454C 564 nt1.35□□□□□ -2.19
SHH4Q06236 NOP10YHR072W-A 177 nt1.35□□□□□ -2.19
SHH4Q06236 YHR073W-AYHR073W-A 177 nt1.35□□□□□ -2.19
SHH4Q06236 YJL133C-AYJL133C-A 225 nt1.35□□□□□ -2.19
SHH4Q06236 SUI2YJR007W 915 nt1.35□□□□□ -2.19
SHH4Q06236 COA4YLR218C 453 nt1.35□□□□□ -2.19
SHH4Q06236 YML094C-AYML094C-A 402 nt1.35□□□□□ -2.19
SHH4Q06236 PET20YPL159C 762 nt1.35□□□□□ -2.19
SHH4Q06236 YBR062CYBR062C 543 nt1.35□□□□□ -2.19
SHH4Q06236 UTP22YGR090W 3714 nt1.35□□□□□ -2.19
SHH4Q06236 NAB6YML117W 3405 nt1.35□□□□□ -2.19
SHH4Q06236 SPC72YAL047C 1869 nt1.35□□□□□ -2.19
SHH4Q06236 SSF2YDR312W 1362 nt1.34□□□□□ -2.19
SHH4Q06236 PRE1YER012W 597 nt1.34□□□□□ -2.19
SHH4Q06236 snR24snR24 89 nt1.34□□□□□ -2.19
SHH4Q06236 RPB5YBR154C 648 nt1.34□□□□□ -2.19
SHH4Q06236 CSH1YBR161W 1131 nt1.34□□□□□ -2.19
SHH4Q06236 RPN3YER021W 1572 nt1.34□□□□□ -2.2
SHH4Q06236 LEU3YLR451W 2661 nt1.33□□□□□ -2.2
SHH4Q06236 PSF2YJL072C 642 nt1.33□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 21.5 ms