Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP46P62068 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP46P62068 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.66■■□□□ 1.06
USP46P62068 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP46P62068 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP46P62068 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.66■■□□□ 1.06
USP46P62068 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP46P62068 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP46P62068 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.65■■□□□ 1.06
USP46P62068 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.65■■□□□ 1.06
USP46P62068 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP46P62068 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.65■■□□□ 1.06
USP46P62068 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
USP46P62068 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
USP46P62068 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USP46P62068 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP46P62068 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP46P62068 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.65■■□□□ 1.06
USP46P62068 LSM12P1-201ENST00000411836 588 ntBASIC21.65■■□□□ 1.06
USP46P62068 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
USP46P62068 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.65■■□□□ 1.06
USP46P62068 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP46P62068 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.65■■□□□ 1.06
USP46P62068 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
USP46P62068 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP46P62068 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USP46P62068 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.64■■□□□ 1.06
USP46P62068 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
USP46P62068 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
USP46P62068 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
USP46P62068 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
USP46P62068 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.64■■□□□ 1.06
USP46P62068 RNF165-205ENST00000588679 2904 ntBASIC21.64■■□□□ 1.06
USP46P62068 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
USP46P62068 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP46P62068 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
USP46P62068 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
USP46P62068 MCRIP2P1-201ENST00000394346 511 ntBASIC21.64■■□□□ 1.05
USP46P62068 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP46P62068 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
USP46P62068 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
USP46P62068 AC097658.1-201ENST00000475555 843 ntBASIC21.64■■□□□ 1.05
USP46P62068 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.64■■□□□ 1.05
USP46P62068 RNA5SP413-201ENST00000516373 109 ntBASIC21.64■■□□□ 1.05
USP46P62068 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.64■■□□□ 1.05
USP46P62068 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.64■■□□□ 1.05
USP46P62068 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP46P62068 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP46P62068 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP46P62068 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP46P62068 CYP21A1P-202ENST00000354927 1481 ntBASIC21.64■■□□□ 1.05
USP46P62068 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP46P62068 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP46P62068 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.63■■□□□ 1.05
USP46P62068 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
USP46P62068 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP46P62068 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP46P62068 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP46P62068 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USP46P62068 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP46P62068 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.63■■□□□ 1.05
USP46P62068 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
USP46P62068 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.63■■□□□ 1.05
USP46P62068 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.63■■□□□ 1.05
USP46P62068 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USP46P62068 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP46P62068 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USP46P62068 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
USP46P62068 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USP46P62068 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.62■■□□□ 1.05
USP46P62068 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.62■■□□□ 1.05
USP46P62068 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP46P62068 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
USP46P62068 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP46P62068 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
USP46P62068 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.62■■□□□ 1.05
USP46P62068 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.62■■□□□ 1.05
USP46P62068 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.62■■□□□ 1.05
USP46P62068 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.62■■□□□ 1.05
USP46P62068 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.62■■□□□ 1.05
USP46P62068 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP46P62068 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP46P62068 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USP46P62068 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.61■■□□□ 1.05
USP46P62068 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP46P62068 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP46P62068 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
USP46P62068 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP46P62068 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
USP46P62068 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP46P62068 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP46P62068 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP46P62068 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
USP46P62068 KRT18P68-201ENST00000392293 1000 ntBASIC21.61■■□□□ 1.05
USP46P62068 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
USP46P62068 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
USP46P62068 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.61■■□□□ 1.05
USP46P62068 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.61■■□□□ 1.05
USP46P62068 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.61■■□□□ 1.05
USP46P62068 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms