Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.81■■□□□ 1.08
ERVFC1P60507 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ERVFC1P60507 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ERVFC1P60507 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.81■■□□□ 1.08
ERVFC1P60507 TSPY15P-201ENST00000457163 923 ntBASIC21.81■■□□□ 1.08
ERVFC1P60507 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ERVFC1P60507 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ERVFC1P60507 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.81■■□□□ 1.08
ERVFC1P60507 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.81■■□□□ 1.08
ERVFC1P60507 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ERVFC1P60507 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERVFC1P60507 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
ERVFC1P60507 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERVFC1P60507 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.81■■□□□ 1.08
ERVFC1P60507 KRT17P2-201ENST00000300992 1314 ntBASIC21.8■■□□□ 1.08
ERVFC1P60507 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.8■■□□□ 1.08
ERVFC1P60507 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.8■■□□□ 1.08
ERVFC1P60507 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ERVFC1P60507 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.8■■□□□ 1.08
ERVFC1P60507 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ERVFC1P60507 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERVFC1P60507 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ERVFC1P60507 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ERVFC1P60507 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERVFC1P60507 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
ERVFC1P60507 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ERVFC1P60507 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.8■■□□□ 1.08
ERVFC1P60507 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.8■■□□□ 1.08
ERVFC1P60507 KRT18P21-201ENST00000515767 1272 ntBASIC21.8■■□□□ 1.08
ERVFC1P60507 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.8■■□□□ 1.08
ERVFC1P60507 AL049637.2-201ENST00000641778 930 ntBASIC21.8■■□□□ 1.08
ERVFC1P60507 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERVFC1P60507 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.8■■□□□ 1.08
ERVFC1P60507 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERVFC1P60507 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
ERVFC1P60507 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ERVFC1P60507 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.8■■□□□ 1.08
ERVFC1P60507 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.79■■□□□ 1.08
ERVFC1P60507 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERVFC1P60507 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ERVFC1P60507 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ERVFC1P60507 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERVFC1P60507 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
ERVFC1P60507 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.79■■□□□ 1.08
ERVFC1P60507 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERVFC1P60507 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
ERVFC1P60507 AC239809.2-201ENST00000415381 517 ntBASIC21.79■■□□□ 1.08
ERVFC1P60507 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.79■■□□□ 1.08
ERVFC1P60507 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ERVFC1P60507 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.79■■□□□ 1.08
ERVFC1P60507 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
ERVFC1P60507 AC005829.2-201ENST00000571422 1056 ntBASIC21.79■■□□□ 1.08
ERVFC1P60507 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ERVFC1P60507 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
ERVFC1P60507 AC010331.1-201ENST00000611423 582 ntBASIC21.79■■□□□ 1.08
ERVFC1P60507 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
ERVFC1P60507 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.79■■□□□ 1.08
ERVFC1P60507 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.79■■□□□ 1.08
ERVFC1P60507 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.79■■□□□ 1.08
ERVFC1P60507 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.79■■□□□ 1.08
ERVFC1P60507 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.79■■□□□ 1.08
ERVFC1P60507 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.79■■□□□ 1.08
ERVFC1P60507 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ERVFC1P60507 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.78■■□□□ 1.08
ERVFC1P60507 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ERVFC1P60507 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.78■■□□□ 1.08
ERVFC1P60507 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ERVFC1P60507 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.78■■□□□ 1.08
ERVFC1P60507 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ERVFC1P60507 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ERVFC1P60507 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ERVFC1P60507 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.78■■□□□ 1.08
ERVFC1P60507 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
ERVFC1P60507 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.78■■□□□ 1.08
ERVFC1P60507 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.78■■□□□ 1.08
ERVFC1P60507 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.78■■□□□ 1.08
ERVFC1P60507 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ERVFC1P60507 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ERVFC1P60507 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ERVFC1P60507 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ERVFC1P60507 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
ERVFC1P60507 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ERVFC1P60507 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
ERVFC1P60507 KRASP1-201ENST00000407852 552 ntBASIC21.77■■□□□ 1.08
ERVFC1P60507 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.77■■□□□ 1.08
ERVFC1P60507 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
ERVFC1P60507 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ERVFC1P60507 AC110285.5-201ENST00000611501 352 ntBASIC21.77■■□□□ 1.08
ERVFC1P60507 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ERVFC1P60507 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ERVFC1P60507 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ERVFC1P60507 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.77■■□□□ 1.08
ERVFC1P60507 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.77■■□□□ 1.07
ERVFC1P60507 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ERVFC1P60507 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ERVFC1P60507 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ERVFC1P60507 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ERVFC1P60507 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
ERVFC1P60507 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ERVFC1P60507 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms