Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VSX2P58304 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.68■□□□□ 0.74
VSX2P58304 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VSX2P58304 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VSX2P58304 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VSX2P58304 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VSX2P58304 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VSX2P58304 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
VSX2P58304 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VSX2P58304 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VSX2P58304 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.68■□□□□ 0.74
VSX2P58304 AL138781.1-201ENST00000566567 1274 ntBASIC19.68■□□□□ 0.74
VSX2P58304 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.68■□□□□ 0.74
VSX2P58304 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.68■□□□□ 0.74
VSX2P58304 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.68■□□□□ 0.74
VSX2P58304 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.68■□□□□ 0.74
VSX2P58304 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VSX2P58304 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VSX2P58304 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VSX2P58304 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
VSX2P58304 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VSX2P58304 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
VSX2P58304 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
VSX2P58304 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
VSX2P58304 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.67■□□□□ 0.74
VSX2P58304 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
VSX2P58304 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.67■□□□□ 0.74
VSX2P58304 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VSX2P58304 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VSX2P58304 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VSX2P58304 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VSX2P58304 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VSX2P58304 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VSX2P58304 SLC25A24-204ENST00000569674 2357 ntBASIC19.66■□□□□ 0.74
VSX2P58304 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
VSX2P58304 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VSX2P58304 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.66■□□□□ 0.74
VSX2P58304 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VSX2P58304 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.66■□□□□ 0.74
VSX2P58304 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VSX2P58304 MIPEPP3-201ENST00000412105 444 ntBASIC19.66■□□□□ 0.74
VSX2P58304 BX276092.2-201ENST00000417668 665 ntBASIC19.66■□□□□ 0.74
VSX2P58304 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
VSX2P58304 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.66■□□□□ 0.74
VSX2P58304 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.66■□□□□ 0.74
VSX2P58304 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.66■□□□□ 0.74
VSX2P58304 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VSX2P58304 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.66■□□□□ 0.74
VSX2P58304 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.66■□□□□ 0.74
VSX2P58304 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
VSX2P58304 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.66■□□□□ 0.74
VSX2P58304 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VSX2P58304 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VSX2P58304 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VSX2P58304 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
VSX2P58304 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.66■□□□□ 0.74
VSX2P58304 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VSX2P58304 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.65■□□□□ 0.74
VSX2P58304 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VSX2P58304 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSX2P58304 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.65■□□□□ 0.74
VSX2P58304 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSX2P58304 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSX2P58304 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VSX2P58304 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSX2P58304 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.65■□□□□ 0.74
VSX2P58304 AL355472.2-201ENST00000422958 438 ntBASIC19.65■□□□□ 0.74
VSX2P58304 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.65■□□□□ 0.74
VSX2P58304 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.65■□□□□ 0.74
VSX2P58304 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.65■□□□□ 0.74
VSX2P58304 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.65■□□□□ 0.74
VSX2P58304 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSX2P58304 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.65■□□□□ 0.74
VSX2P58304 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSX2P58304 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
VSX2P58304 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VSX2P58304 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSX2P58304 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
VSX2P58304 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
VSX2P58304 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.64■□□□□ 0.74
VSX2P58304 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
VSX2P58304 AC007375.3-201ENST00000600936 2314 ntBASIC19.64■□□□□ 0.74
VSX2P58304 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
VSX2P58304 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.64■□□□□ 0.73
VSX2P58304 AC142086.2-201ENST00000569753 217 ntBASIC19.64■□□□□ 0.73
VSX2P58304 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.64■□□□□ 0.73
VSX2P58304 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
VSX2P58304 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.64■□□□□ 0.73
VSX2P58304 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
VSX2P58304 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VSX2P58304 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VSX2P58304 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.64■□□□□ 0.73
VSX2P58304 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VSX2P58304 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VSX2P58304 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VSX2P58304 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
VSX2P58304 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VSX2P58304 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
VSX2P58304 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VSX2P58304 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms