Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN2P57739 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
CLDN2P57739 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.37■□□□□ 0.85
CLDN2P57739 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN2P57739 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CLDN2P57739 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CLDN2P57739 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN2P57739 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN2P57739 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN2P57739 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN2P57739 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CLDN2P57739 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN2P57739 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN2P57739 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN2P57739 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN2P57739 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CLDN2P57739 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CLDN2P57739 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN2P57739 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.36■□□□□ 0.85
CLDN2P57739 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.36■□□□□ 0.85
CLDN2P57739 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN2P57739 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CLDN2P57739 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN2P57739 AC105020.6-201ENST00000621523 1217 ntBASIC20.36■□□□□ 0.85
CLDN2P57739 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN2P57739 HLA-B-256ENST00000639848 1089 ntBASIC20.36■□□□□ 0.85
CLDN2P57739 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
CLDN2P57739 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN2P57739 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN2P57739 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN2P57739 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CLDN2P57739 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.35■□□□□ 0.85
CLDN2P57739 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN2P57739 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN2P57739 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN2P57739 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN2P57739 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.35■□□□□ 0.85
CLDN2P57739 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.35■□□□□ 0.85
CLDN2P57739 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.35■□□□□ 0.85
CLDN2P57739 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN2P57739 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CLDN2P57739 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN2P57739 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN2P57739 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
CLDN2P57739 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.35■□□□□ 0.85
CLDN2P57739 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.35■□□□□ 0.85
CLDN2P57739 AC093827.2-201ENST00000512654 315 ntBASIC20.35■□□□□ 0.85
CLDN2P57739 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN2P57739 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN2P57739 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN2P57739 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN2P57739 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.35■□□□□ 0.85
CLDN2P57739 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN2P57739 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN2P57739 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN2P57739 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN2P57739 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CLDN2P57739 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN2P57739 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CLDN2P57739 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN2P57739 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN2P57739 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN2P57739 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN2P57739 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.34■□□□□ 0.85
CLDN2P57739 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN2P57739 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN2P57739 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN2P57739 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CLDN2P57739 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.34■□□□□ 0.85
CLDN2P57739 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN2P57739 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN2P57739 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.34■□□□□ 0.85
CLDN2P57739 AC073648.6-201ENST00000641589 218 ntBASIC20.34■□□□□ 0.85
CLDN2P57739 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN2P57739 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CLDN2P57739 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN2P57739 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CLDN2P57739 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN2P57739 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN2P57739 AC092368.3-202ENST00000574180 1591 ntBASIC20.34■□□□□ 0.85
CLDN2P57739 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN2P57739 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CLDN2P57739 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN2P57739 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
CLDN2P57739 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN2P57739 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN2P57739 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN2P57739 AL158047.1-201ENST00000445918 881 ntBASIC20.33■□□□□ 0.85
CLDN2P57739 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN2P57739 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.33■□□□□ 0.85
CLDN2P57739 PNMA6B-201ENST00000538162 1200 ntBASIC20.33■□□□□ 0.85
CLDN2P57739 AC008403.3-201ENST00000598924 454 ntBASIC20.33■□□□□ 0.85
CLDN2P57739 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.33■□□□□ 0.85
CLDN2P57739 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN2P57739 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.33■□□□□ 0.84
CLDN2P57739 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN2P57739 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN2P57739 AC244015.2-201ENST00000616358 1861 ntBASIC20.33■□□□□ 0.84
CLDN2P57739 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CLDN2P57739 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms