Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB38P57729 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RAB38P57729 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB38P57729 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB38P57729 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB38P57729 AC027702.1-201ENST00000563810 1770 ntBASIC19.37■□□□□ 0.69
RAB38P57729 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB38P57729 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
RAB38P57729 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RAB38P57729 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB38P57729 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB38P57729 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB38P57729 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.36■□□□□ 0.69
RAB38P57729 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB38P57729 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB38P57729 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB38P57729 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB38P57729 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.36■□□□□ 0.69
RAB38P57729 AC105036.2-201ENST00000569468 176 ntBASIC19.36■□□□□ 0.69
RAB38P57729 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB38P57729 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB38P57729 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB38P57729 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB38P57729 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
RAB38P57729 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB38P57729 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB38P57729 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB38P57729 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB38P57729 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB38P57729 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.35■□□□□ 0.69
RAB38P57729 NCF1B-203ENST00000435988 1254 ntBASIC19.35■□□□□ 0.69
RAB38P57729 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB38P57729 AC093787.1-201ENST00000450396 207 ntBASIC19.35■□□□□ 0.69
RAB38P57729 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.35■□□□□ 0.69
RAB38P57729 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB38P57729 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB38P57729 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB38P57729 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB38P57729 CYP21A1P-202ENST00000354927 1481 ntBASIC19.35■□□□□ 0.69
RAB38P57729 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB38P57729 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB38P57729 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB38P57729 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB38P57729 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB38P57729 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB38P57729 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB38P57729 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.34■□□□□ 0.69
RAB38P57729 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.34■□□□□ 0.69
RAB38P57729 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.34■□□□□ 0.69
RAB38P57729 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RAB38P57729 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB38P57729 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB38P57729 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB38P57729 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB38P57729 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB38P57729 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB38P57729 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB38P57729 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB38P57729 AC010980.2-201ENST00000587099 1412 ntBASIC19.34■□□□□ 0.69
RAB38P57729 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.69
RAB38P57729 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB38P57729 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB38P57729 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.33■□□□□ 0.69
RAB38P57729 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RAB38P57729 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB38P57729 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RAB38P57729 GPX1P1-201ENST00000388829 606 ntBASIC19.33■□□□□ 0.68
RAB38P57729 MCRIP2P1-201ENST00000394346 511 ntBASIC19.33■□□□□ 0.68
RAB38P57729 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAB38P57729 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.33■□□□□ 0.68
RAB38P57729 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.33■□□□□ 0.68
RAB38P57729 AC083906.2-201ENST00000511578 360 ntBASIC19.33■□□□□ 0.68
RAB38P57729 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.33■□□□□ 0.68
RAB38P57729 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB38P57729 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB38P57729 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.33■□□□□ 0.68
RAB38P57729 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB38P57729 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB38P57729 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB38P57729 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB38P57729 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB38P57729 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB38P57729 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB38P57729 MKRN4P-201ENST00000444706 1521 ntBASIC19.32■□□□□ 0.68
RAB38P57729 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB38P57729 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB38P57729 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB38P57729 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB38P57729 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB38P57729 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB38P57729 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.32■□□□□ 0.68
RAB38P57729 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.32■□□□□ 0.68
RAB38P57729 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.32■□□□□ 0.68
RAB38P57729 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB38P57729 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB38P57729 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB38P57729 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RAB38P57729 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB38P57729 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB38P57729 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms