Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN20P56880 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN20P56880 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN20P56880 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN20P56880 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN20P56880 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN20P56880 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CLDN20P56880 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN20P56880 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.82■□□□□ 0.6
CLDN20P56880 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN20P56880 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN20P56880 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN20P56880 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN20P56880 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN20P56880 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CLDN20P56880 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN20P56880 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CLDN20P56880 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN20P56880 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN20P56880 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN20P56880 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN20P56880 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN20P56880 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN20P56880 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CLDN20P56880 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN20P56880 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN20P56880 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN20P56880 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN20P56880 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN20P56880 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLDN20P56880 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CLDN20P56880 CROCCP5-201ENST00000436658 830 ntBASIC18.81■□□□□ 0.6
CLDN20P56880 CNN2P6-201ENST00000439038 900 ntBASIC18.81■□□□□ 0.6
CLDN20P56880 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CLDN20P56880 TERF1P5-201ENST00000477545 1207 ntBASIC18.81■□□□□ 0.6
CLDN20P56880 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN20P56880 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.81■□□□□ 0.6
CLDN20P56880 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN20P56880 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN20P56880 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN20P56880 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN20P56880 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN20P56880 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN20P56880 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN20P56880 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN20P56880 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN20P56880 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN20P56880 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN20P56880 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN20P56880 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN20P56880 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN20P56880 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN20P56880 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN20P56880 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.8■□□□□ 0.6
CLDN20P56880 AC231657.2-201ENST00000624556 255 ntBASIC18.8■□□□□ 0.6
CLDN20P56880 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CLDN20P56880 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLDN20P56880 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN20P56880 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN20P56880 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN20P56880 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN20P56880 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN20P56880 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN20P56880 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN20P56880 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN20P56880 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN20P56880 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN20P56880 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN20P56880 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN20P56880 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN20P56880 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN20P56880 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN20P56880 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN20P56880 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN20P56880 AC007322.1-201ENST00000426983 750 ntBASIC18.79■□□□□ 0.6
CLDN20P56880 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN20P56880 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN20P56880 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN20P56880 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN20P56880 RBM17P2-201ENST00000616397 1405 ntBASIC18.79■□□□□ 0.6
CLDN20P56880 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN20P56880 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN20P56880 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN20P56880 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN20P56880 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN20P56880 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN20P56880 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CLDN20P56880 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN20P56880 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN20P56880 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CLDN20P56880 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN20P56880 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN20P56880 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.78■□□□□ 0.6
CLDN20P56880 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN20P56880 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN20P56880 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN20P56880 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN20P56880 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN20P56880 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN20P56880 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms