Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN12P56749 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN12P56749 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN12P56749 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN12P56749 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
CLDN12P56749 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN12P56749 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.85■□□□□ 0.45
CLDN12P56749 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CLDN12P56749 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN12P56749 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN12P56749 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.85■□□□□ 0.45
CLDN12P56749 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.85■□□□□ 0.45
CLDN12P56749 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CLDN12P56749 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.85■□□□□ 0.45
CLDN12P56749 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.85■□□□□ 0.45
CLDN12P56749 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CLDN12P56749 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN12P56749 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN12P56749 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN12P56749 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.85■□□□□ 0.45
CLDN12P56749 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN12P56749 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.85■□□□□ 0.45
CLDN12P56749 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN12P56749 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN12P56749 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN12P56749 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN12P56749 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN12P56749 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN12P56749 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CLDN12P56749 BX005040.4-201ENST00000637145 1518 ntBASIC17.84■□□□□ 0.45
CLDN12P56749 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN12P56749 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN12P56749 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN12P56749 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN12P56749 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.84■□□□□ 0.45
CLDN12P56749 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN12P56749 AC011298.3-201ENST00000615796 283 ntBASIC17.84■□□□□ 0.45
CLDN12P56749 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN12P56749 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CLDN12P56749 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CLDN12P56749 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN12P56749 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN12P56749 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLDN12P56749 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN12P56749 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN12P56749 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CLDN12P56749 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN12P56749 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.83■□□□□ 0.45
CLDN12P56749 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CLDN12P56749 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CLDN12P56749 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.83■□□□□ 0.44
CLDN12P56749 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN12P56749 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN12P56749 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.83■□□□□ 0.44
CLDN12P56749 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.83■□□□□ 0.44
CLDN12P56749 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.83■□□□□ 0.44
CLDN12P56749 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
CLDN12P56749 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN12P56749 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN12P56749 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN12P56749 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN12P56749 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN12P56749 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN12P56749 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.83■□□□□ 0.44
CLDN12P56749 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN12P56749 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN12P56749 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN12P56749 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN12P56749 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN12P56749 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN12P56749 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN12P56749 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN12P56749 DUX4L19-201ENST00000557448 1267 ntBASIC17.82■□□□□ 0.44
CLDN12P56749 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN12P56749 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN12P56749 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CLDN12P56749 AL020996.1-203ENST00000536896 2307 ntBASIC17.82■□□□□ 0.44
CLDN12P56749 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN12P56749 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN12P56749 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN12P56749 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CLDN12P56749 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN12P56749 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN12P56749 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CLDN12P56749 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN12P56749 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN12P56749 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.81■□□□□ 0.44
CLDN12P56749 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN12P56749 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.81■□□□□ 0.44
CLDN12P56749 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN12P56749 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CLDN12P56749 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN12P56749 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN12P56749 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN12P56749 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CLDN12P56749 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN12P56749 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN12P56749 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLDN12P56749 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.8■□□□□ 0.44
CLDN12P56749 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms