Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HMGCS2P54868 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.88■■□□□ 1.41
HMGCS2P54868 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HMGCS2P54868 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.88■■□□□ 1.41
HMGCS2P54868 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HMGCS2P54868 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HMGCS2P54868 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.88■■□□□ 1.41
HMGCS2P54868 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HMGCS2P54868 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HMGCS2P54868 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HMGCS2P54868 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.88■■□□□ 1.41
HMGCS2P54868 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
HMGCS2P54868 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.88■■□□□ 1.41
HMGCS2P54868 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.88■■□□□ 1.41
HMGCS2P54868 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HMGCS2P54868 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.88■■□□□ 1.41
HMGCS2P54868 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HMGCS2P54868 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HMGCS2P54868 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HMGCS2P54868 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.87■■□□□ 1.41
HMGCS2P54868 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HMGCS2P54868 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
HMGCS2P54868 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HMGCS2P54868 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
HMGCS2P54868 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HMGCS2P54868 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
HMGCS2P54868 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.87■■□□□ 1.41
HMGCS2P54868 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
HMGCS2P54868 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.87■■□□□ 1.41
HMGCS2P54868 MTDHP1-201ENST00000605323 784 ntBASIC23.87■■□□□ 1.41
HMGCS2P54868 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
HMGCS2P54868 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HMGCS2P54868 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HMGCS2P54868 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
HMGCS2P54868 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.87■■□□□ 1.41
HMGCS2P54868 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HMGCS2P54868 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HMGCS2P54868 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
HMGCS2P54868 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
HMGCS2P54868 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
HMGCS2P54868 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
HMGCS2P54868 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HMGCS2P54868 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.86■■□□□ 1.41
HMGCS2P54868 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
HMGCS2P54868 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.86■■□□□ 1.41
HMGCS2P54868 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
HMGCS2P54868 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
HMGCS2P54868 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HMGCS2P54868 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HMGCS2P54868 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HMGCS2P54868 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
HMGCS2P54868 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
HMGCS2P54868 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
HMGCS2P54868 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.85■■□□□ 1.41
HMGCS2P54868 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
HMGCS2P54868 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
HMGCS2P54868 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HMGCS2P54868 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HMGCS2P54868 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HMGCS2P54868 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HMGCS2P54868 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HMGCS2P54868 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HMGCS2P54868 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HMGCS2P54868 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
HMGCS2P54868 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HMGCS2P54868 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.85■■□□□ 1.41
HMGCS2P54868 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
HMGCS2P54868 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.85■■□□□ 1.41
HMGCS2P54868 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HMGCS2P54868 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.85■■□□□ 1.41
HMGCS2P54868 AC006557.6-201ENST00000623071 864 ntBASIC23.85■■□□□ 1.41
HMGCS2P54868 AC073912.3-201ENST00000624414 853 ntBASIC23.85■■□□□ 1.41
HMGCS2P54868 AL023875.1-201ENST00000640777 796 ntBASIC23.85■■□□□ 1.41
HMGCS2P54868 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HMGCS2P54868 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HMGCS2P54868 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.85■■□□□ 1.41
HMGCS2P54868 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HMGCS2P54868 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HMGCS2P54868 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
HMGCS2P54868 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.84■■□□□ 1.41
HMGCS2P54868 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.84■■□□□ 1.41
HMGCS2P54868 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.84■■□□□ 1.41
HMGCS2P54868 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HMGCS2P54868 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HMGCS2P54868 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
HMGCS2P54868 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HMGCS2P54868 LY6E-205ENST00000519611 635 ntTSL 3 BASIC23.84■■□□□ 1.41
HMGCS2P54868 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
HMGCS2P54868 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.84■■□□□ 1.41
HMGCS2P54868 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.84■■□□□ 1.41
HMGCS2P54868 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC23.84■■□□□ 1.41
HMGCS2P54868 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HMGCS2P54868 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.84■■□□□ 1.41
HMGCS2P54868 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.84■■□□□ 1.41
HMGCS2P54868 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.84■■□□□ 1.41
HMGCS2P54868 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
HMGCS2P54868 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
HMGCS2P54868 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.83■■□□□ 1.41
HMGCS2P54868 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HMGCS2P54868 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms