Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA2P52926 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.8■□□□□ 0.6
HMGA2P52926 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA2P52926 AC012414.1-201ENST00000556676 535 ntBASIC18.8■□□□□ 0.6
HMGA2P52926 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA2P52926 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA2P52926 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HMGA2P52926 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA2P52926 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.79■□□□□ 0.6
HMGA2P52926 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HMGA2P52926 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA2P52926 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA2P52926 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HMGA2P52926 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.79■□□□□ 0.6
HMGA2P52926 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.79■□□□□ 0.6
HMGA2P52926 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.79■□□□□ 0.6
HMGA2P52926 AC008175.2-201ENST00000612840 297 ntBASIC18.79■□□□□ 0.6
HMGA2P52926 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA2P52926 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA2P52926 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HMGA2P52926 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.79■□□□□ 0.6
HMGA2P52926 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA2P52926 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA2P52926 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
HMGA2P52926 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGA2P52926 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMGA2P52926 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGA2P52926 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HMGA2P52926 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGA2P52926 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMGA2P52926 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGA2P52926 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.78■□□□□ 0.6
HMGA2P52926 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HMGA2P52926 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGA2P52926 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.78■□□□□ 0.6
HMGA2P52926 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGA2P52926 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.78■□□□□ 0.6
HMGA2P52926 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGA2P52926 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
HMGA2P52926 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.78■□□□□ 0.6
HMGA2P52926 TPRG1LP1-201ENST00000598702 760 ntBASIC18.78■□□□□ 0.6
HMGA2P52926 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.78■□□□□ 0.6
HMGA2P52926 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGA2P52926 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGA2P52926 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGA2P52926 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.78■□□□□ 0.6
HMGA2P52926 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGA2P52926 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMGA2P52926 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
HMGA2P52926 SMG8-203ENST00000578922 2178 ntBASIC18.78■□□□□ 0.6
HMGA2P52926 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGA2P52926 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.77■□□□□ 0.6
HMGA2P52926 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.77■□□□□ 0.6
HMGA2P52926 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HMGA2P52926 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
HMGA2P52926 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.77■□□□□ 0.6
HMGA2P52926 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.77■□□□□ 0.6
HMGA2P52926 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.77■□□□□ 0.6
HMGA2P52926 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
HMGA2P52926 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.77■□□□□ 0.6
HMGA2P52926 MIR2861-201ENST00000636310 90 ntBASIC18.77■□□□□ 0.6
HMGA2P52926 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.77■□□□□ 0.6
HMGA2P52926 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGA2P52926 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.77■□□□□ 0.6
HMGA2P52926 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
HMGA2P52926 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
HMGA2P52926 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.77■□□□□ 0.59
HMGA2P52926 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGA2P52926 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGA2P52926 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGA2P52926 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGA2P52926 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
HMGA2P52926 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGA2P52926 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGA2P52926 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGA2P52926 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGA2P52926 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGA2P52926 RASA4CP-201ENST00000424092 1398 ntBASIC18.76■□□□□ 0.59
HMGA2P52926 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGA2P52926 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGA2P52926 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGA2P52926 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGA2P52926 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGA2P52926 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMGA2P52926 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGA2P52926 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGA2P52926 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGA2P52926 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGA2P52926 EDA-201ENST00000338901 1233 ntBASIC18.75■□□□□ 0.59
HMGA2P52926 AP001330.3-201ENST00000520123 633 ntBASIC18.75■□□□□ 0.59
HMGA2P52926 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.75■□□□□ 0.59
HMGA2P52926 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.75■□□□□ 0.59
HMGA2P52926 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.75■□□□□ 0.59
HMGA2P52926 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGA2P52926 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
HMGA2P52926 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HMGA2P52926 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGA2P52926 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGA2P52926 KRT16P2-201ENST00000414673 1423 ntBASIC18.74■□□□□ 0.59
HMGA2P52926 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms