Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.88■□□□□ 0.614e-7■■■□□ 17.3
NCBP2P52298 HDAC4-216ENST00000544989 342 ntTSL 510.85□□□□□ -0.674e-7■■■□□ 17.3
NCBP2P52298 HDAC4-210ENST00000493582 3188 ntTSL 1 (best)10.8□□□□□ -0.684e-7■■■□□ 17.3
NCBP2P52298 RARRES2-204ENST00000478771 1907 ntTSL 220.26■□□□□ 0.837e-7■■■□□ 17.3
NCBP2P52298 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.737e-7■■■□□ 17.3
NCBP2P52298 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.717e-7■■■□□ 17.3
NCBP2P52298 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.317e-7■■■□□ 17.3
NCBP2P52298 RARRES2-203ENST00000467793 583 ntTSL 314.46□□□□□ -0.097e-7■■■□□ 17.3
NCBP2P52298 MAPK12-204ENST00000467891 2019 ntTSL 527.96■■■□□ 2.072e-9■■■□□ 17.3
NCBP2P52298 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.672e-9■■■□□ 17.3
NCBP2P52298 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.86■□□□□ 0.932e-9■■■□□ 17.3
NCBP2P52298 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.28■□□□□ 0.846e-7■■■□□ 17.3
NCBP2P52298 PCGF3-210ENST00000482726 538 ntTSL 419.06■□□□□ 0.646e-7■■■□□ 17.3
NCBP2P52298 PCGF3-204ENST00000427463 582 ntTSL 319.06■□□□□ 0.646e-7■■■□□ 17.3
NCBP2P52298 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.466e-7■■■□□ 17.3
NCBP2P52298 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.36e-7■■■□□ 17.3
NCBP2P52298 PCGF3-205ENST00000430644 2621 ntTSL 216.18■□□□□ 0.186e-7■■■□□ 17.3
NCBP2P52298 PCGF3-209ENST00000475288 604 ntTSL 315.97■□□□□ 0.156e-7■■■□□ 17.3
NCBP2P52298 PCGF3-211ENST00000484141 566 ntTSL 215.21■□□□□ 0.036e-7■■■□□ 17.3
NCBP2P52298 PCGF3-203ENST00000419774 589 ntTSL 515.13■□□□□ 0.016e-7■■■□□ 17.3
NCBP2P52298 KDM4B-206ENST00000588361 3039 ntTSL 214.46□□□□□ -0.094e-6■■■□□ 17.3
NCBP2P52298 KDM4B-208ENST00000589104 3470 ntTSL 212.42□□□□□ -0.424e-6■■■□□ 17.3
NCBP2P52298 KDM4B-207ENST00000588961 560 ntTSL 48.12□□□□□ -1.114e-6■■■□□ 17.3
NCBP2P52298 ASL-210ENST00000496336 996 ntTSL 1 (best)19.69■□□□□ 0.745e-8■■■□□ 17.3
NCBP2P52298 ASL-207ENST00000487982 1007 ntTSL 217.84■□□□□ 0.455e-8■■■□□ 17.3
NCBP2P52298 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.155e-8■■■□□ 17.3
NCBP2P52298 DAZAP1-206ENST00000587833 560 ntTSL 59.72□□□□□ -0.852e-7■■■□□ 17.3
NCBP2P52298 CAPN15-202ENST00000562370 942 ntTSL 224.38■■□□□ 1.491e-6■■■□□ 17.3
NCBP2P52298 TBRG1-205ENST00000473629 1634 ntTSL 517.71■□□□□ 0.433e-8■■■□□ 17.3
NCBP2P52298 TBRG1-208ENST00000530731 1571 ntTSL 1 (best)15.69■□□□□ 0.13e-8■■■□□ 17.3
NCBP2P52298 TBRG1-210ENST00000531667 552 ntTSL 413.1□□□□□ -0.313e-8■■■□□ 17.3
NCBP2P52298 TBRG1-204ENST00000452080 730 ntTSL 311.98□□□□□ -0.493e-8■■■□□ 17.3
NCBP2P52298 TBRG1-201ENST00000284290 4468 ntTSL 1 (best)11.13□□□□□ -0.633e-8■■■□□ 17.3
NCBP2P52298 TBRG1-203ENST00000441174 4004 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.773e-8■■■□□ 17.3
NCBP2P52298 TBK1-203ENST00000538890 547 ntTSL 421.02■□□□□ 0.967e-8■■■□□ 17.3
NCBP2P52298 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.127e-8■■■□□ 17.3
NCBP2P52298 STAT5B-203ENST00000468312 1799 ntTSL 1 (best)21.72■■□□□ 1.073e-11■■■□□ 17.3
NCBP2P52298 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.033e-11■■■□□ 17.3
NCBP2P52298 STAT5B-202ENST00000415845 559 ntTSL 46.58□□□□□ -1.363e-11■■■□□ 17.3
NCBP2P52298 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.348e-7■■■□□ 17.2
NCBP2P52298 OSBPL2-208ENST00000618509 582 ntTSL 412.37□□□□□ -0.438e-7■■■□□ 17.2
NCBP2P52298 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC11.94□□□□□ -0.58e-7■■■□□ 17.2
NCBP2P52298 OSBPL2-202ENST00000358053 3936 ntTSL 1 (best) BASIC10.07□□□□□ -0.88e-7■■■□□ 17.2
NCBP2P52298 OSBPL2-211ENST00000622332 754 ntTSL 39.29□□□□□ -0.928e-7■■■□□ 17.2
NCBP2P52298 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.96■□□□□ 0.37e-7■■■□□ 17.2
NCBP2P52298 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.117e-7■■■□□ 17.2
NCBP2P52298 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.62□□□□□ -0.237e-7■■■□□ 17.2
NCBP2P52298 ALAS2-205ENST00000463868 646 ntTSL 312.97□□□□□ -0.337e-7■■■□□ 17.2
NCBP2P52298 ALAS2-207ENST00000493869 658 ntTSL 212.97□□□□□ -0.337e-7■■■□□ 17.2
NCBP2P52298 ALAS2-206ENST00000477869 582 ntTSL 511.03□□□□□ -0.647e-7■■■□□ 17.2
NCBP2P52298 ALAS2-204ENST00000455688 664 ntTSL 25.98□□□□□ -1.457e-7■■■□□ 17.2
NCBP2P52298 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.231e-6■■■□□ 17.2
NCBP2P52298 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.715e-7■■■□□ 17.2
NCBP2P52298 ARFRP1-211ENST00000618568 1612 ntTSL 319.37■□□□□ 0.695e-7■■■□□ 17.2
NCBP2P52298 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.25■□□□□ 0.675e-7■■■□□ 17.2
NCBP2P52298 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.14■□□□□ 0.655e-7■■■□□ 17.2
NCBP2P52298 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.12■□□□□ 0.335e-7■■■□□ 17.2
NCBP2P52298 FADS3-205ENST00000526294 550 ntTSL 316.52■□□□□ 0.241e-6■■■□□ 17.2
NCBP2P52298 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.186e-7■■■□□ 17.2
NCBP2P52298 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.136e-7■■■□□ 17.2
NCBP2P52298 ARFRP1-206ENST00000610774 5178 ntTSL 214.35□□□□□ -0.111e-6■■■□□ 17.2
NCBP2P52298 ARFRP1-204ENST00000609537 593 ntTSL 312.58□□□□□ -0.41e-6■■■□□ 17.2
NCBP2P52298 SLC25A28-204ENST00000496035 744 ntTSL 37.67□□□□□ -1.181e-6■■■□□ 17.2
NCBP2P52298 UBA6-205ENST00000506571 385 ntTSL 217.11■□□□□ 0.333e-7■■■□□ 17.2
NCBP2P52298 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.94□□□□□ -0.183e-7■■■□□ 17.2
NCBP2P52298 UBA6-203ENST00000429659 2387 ntTSL 213.06□□□□□ -0.323e-7■■■□□ 17.2
NCBP2P52298 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC9.72□□□□□ -0.853e-7■■■□□ 17.2
NCBP2P52298 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.773e-7■■■□□ 17.2
NCBP2P52298 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.65■□□□□ 0.582e-6■■■□□ 17.2
NCBP2P52298 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.32e-6■■■□□ 17.2
NCBP2P52298 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC10.68□□□□□ -0.72e-6■■■□□ 17.2
NCBP2P52298 ILF3-208ENST00000587928 4230 ntTSL 210.07□□□□□ -0.82e-6■■■□□ 17.2
NCBP2P52298 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.461e-6■■■□□ 17.2
NCBP2P52298 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.373e-8■■■□□ 17.2
NCBP2P52298 AC132192.2-201ENST00000596206 1147 ntBASIC13.71□□□□□ -0.219e-7■■■□□ 17.2
NCBP2P52298 CEP170-225ENST00000523581 582 ntTSL 215.58■□□□□ 0.087e-7■■■□□ 17.1
NCBP2P52298 CEP170-223ENST00000522995 608 ntTSL 314.4□□□□□ -0.17e-7■■■□□ 17.1
NCBP2P52298 CEP170-221ENST00000522522 1180 ntTSL 1 (best)13.33□□□□□ -0.287e-7■■■□□ 17.1
NCBP2P52298 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC11.96□□□□□ -0.497e-7■■■□□ 17.1
NCBP2P52298 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC11.89□□□□□ -0.517e-7■■■□□ 17.1
NCBP2P52298 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.081e-7■■■□□ 17.1
NCBP2P52298 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.68□□□□□ -0.382e-13■■■□□ 17.1
NCBP2P52298 USO1-204ENST00000514213 4034 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.732e-13■■■□□ 17.1
NCBP2P52298 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.799e-7■■■□□ 17.1
NCBP2P52298 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.242e-7■■■□□ 17.1
NCBP2P52298 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.252e-7■■■□□ 17.1
NCBP2P52298 UBAP2-212ENST00000629575 3460 ntTSL 26.82□□□□□ -1.322e-7■■■□□ 17.1
NCBP2P52298 UBAP2-208ENST00000459988 2628 ntTSL 26.1□□□□□ -1.432e-7■■■□□ 17.1
NCBP2P52298 UBAP2-206ENST00000412543 1349 ntTSL 55.82□□□□□ -1.482e-7■■■□□ 17.1
NCBP2P52298 UBAP2-210ENST00000480885 4572 ntTSL 22.85□□□□□ -1.952e-7■■■□□ 17.1
NCBP2P52298 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.322e-8■■■□□ 17.1
NCBP2P52298 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.01□□□□□ -0.332e-8■■■□□ 17.1
NCBP2P52298 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC12.44□□□□□ -0.422e-8■■■□□ 17.1
NCBP2P52298 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC12.16□□□□□ -0.462e-8■■■□□ 17.1
NCBP2P52298 FOXP4-AS1-201ENST00000414386 419 ntTSL 212.16□□□□□ -0.462e-8■■■□□ 17.1
NCBP2P52298 FOXP4-AS1-204ENST00000440194 196 ntTSL 38.21□□□□□ -1.12e-8■■■□□ 17.1
NCBP2P52298 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.79■□□□□ 0.762e-6■■■□□ 17.1
NCBP2P52298 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.23■□□□□ 0.192e-6■■■□□ 17.1
NCBP2P52298 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.54■□□□□ 0.088e-13■■■□□ 17.1
NCBP2P52298 EIF4A1-235ENST00000584860 1109 ntTSL 312.64□□□□□ -0.398e-7■■■□□ 17.1
Retrieved 100 of 18,329 protein–RNA pairs in 326.9 ms