Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLK3P49761 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLK3P49761 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.42■□□□□ 0.7
CLK3P49761 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CLK3P49761 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.42■□□□□ 0.7
CLK3P49761 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLK3P49761 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLK3P49761 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.41■□□□□ 0.7
CLK3P49761 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLK3P49761 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.41■□□□□ 0.7
CLK3P49761 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.41■□□□□ 0.7
CLK3P49761 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLK3P49761 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.41■□□□□ 0.7
CLK3P49761 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.41■□□□□ 0.7
CLK3P49761 AC087623.3-201ENST00000607047 1098 ntBASIC19.41■□□□□ 0.7
CLK3P49761 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CLK3P49761 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLK3P49761 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLK3P49761 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLK3P49761 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.41■□□□□ 0.7
CLK3P49761 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLK3P49761 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLK3P49761 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.4■□□□□ 0.7
CLK3P49761 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLK3P49761 AC073314.1-201ENST00000568729 2216 ntBASIC19.4■□□□□ 0.7
CLK3P49761 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLK3P49761 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.4■□□□□ 0.7
CLK3P49761 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.4■□□□□ 0.7
CLK3P49761 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.4■□□□□ 0.7
CLK3P49761 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.4■□□□□ 0.7
CLK3P49761 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.4■□□□□ 0.7
CLK3P49761 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.4■□□□□ 0.7
CLK3P49761 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.4■□□□□ 0.7
CLK3P49761 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLK3P49761 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLK3P49761 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.4■□□□□ 0.7
CLK3P49761 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLK3P49761 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLK3P49761 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CLK3P49761 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLK3P49761 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.39■□□□□ 0.7
CLK3P49761 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLK3P49761 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.39■□□□□ 0.7
CLK3P49761 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.39■□□□□ 0.69
CLK3P49761 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.39■□□□□ 0.69
CLK3P49761 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLK3P49761 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CLK3P49761 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.39■□□□□ 0.69
CLK3P49761 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.39■□□□□ 0.69
CLK3P49761 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.39■□□□□ 0.69
CLK3P49761 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLK3P49761 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLK3P49761 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLK3P49761 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLK3P49761 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.39■□□□□ 0.69
CLK3P49761 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLK3P49761 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLK3P49761 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLK3P49761 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.39■□□□□ 0.69
CLK3P49761 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLK3P49761 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLK3P49761 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLK3P49761 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CLK3P49761 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLK3P49761 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLK3P49761 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CLK3P49761 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLK3P49761 KRT19P1-201ENST00000405746 1186 ntBASIC19.38■□□□□ 0.69
CLK3P49761 AC026271.2-201ENST00000428091 497 ntBASIC19.38■□□□□ 0.69
CLK3P49761 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLK3P49761 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLK3P49761 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CLK3P49761 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.38■□□□□ 0.69
CLK3P49761 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLK3P49761 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.38■□□□□ 0.69
CLK3P49761 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLK3P49761 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.38■□□□□ 0.69
CLK3P49761 DUX4L2-201ENST00000561772 1275 ntBASIC19.38■□□□□ 0.69
CLK3P49761 EEF1DP3-203ENST00000566025 782 ntBASIC19.38■□□□□ 0.69
CLK3P49761 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CLK3P49761 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.38■□□□□ 0.69
CLK3P49761 AC008175.2-201ENST00000612840 297 ntBASIC19.38■□□□□ 0.69
CLK3P49761 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
CLK3P49761 DUX4L6-201ENST00000626483 1275 ntBASIC19.38■□□□□ 0.69
CLK3P49761 DUX4L1-201ENST00000627662 1275 ntBASIC19.38■□□□□ 0.69
CLK3P49761 DUX4L8-201ENST00000629013 1275 ntBASIC19.38■□□□□ 0.69
CLK3P49761 DUX4L3-201ENST00000630187 1275 ntBASIC19.38■□□□□ 0.69
CLK3P49761 DUX4L7-201ENST00000630678 1275 ntBASIC19.38■□□□□ 0.69
CLK3P49761 DUX4L5-201ENST00000630834 1275 ntBASIC19.38■□□□□ 0.69
CLK3P49761 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.37■□□□□ 0.69
CLK3P49761 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLK3P49761 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLK3P49761 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.37■□□□□ 0.69
CLK3P49761 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLK3P49761 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLK3P49761 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLK3P49761 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CLK3P49761 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.37■□□□□ 0.69
CLK3P49761 NTF6G-201ENST00000591094 616 ntBASIC19.37■□□□□ 0.69
CLK3P49761 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms