Protein–RNA interactions for Protein: P48960

CD97, CD97 antigen, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD97P48960 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CD97P48960 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.64■□□□□ 0.73
CD97P48960 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD97P48960 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.64■□□□□ 0.73
CD97P48960 AC010141.2-201ENST00000452426 721 ntBASIC19.64■□□□□ 0.73
CD97P48960 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD97P48960 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD97P48960 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.64■□□□□ 0.73
CD97P48960 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CD97P48960 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD97P48960 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CD97P48960 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CD97P48960 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD97P48960 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD97P48960 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD97P48960 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD97P48960 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD97P48960 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD97P48960 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.63■□□□□ 0.73
CD97P48960 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD97P48960 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD97P48960 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CD97P48960 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.63■□□□□ 0.73
CD97P48960 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.63■□□□□ 0.73
CD97P48960 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD97P48960 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CD97P48960 LETM1P2-201ENST00000597330 2178 ntBASIC19.63■□□□□ 0.73
CD97P48960 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD97P48960 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.63■□□□□ 0.73
CD97P48960 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD97P48960 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CD97P48960 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.62■□□□□ 0.73
CD97P48960 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD97P48960 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CD97P48960 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CD97P48960 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD97P48960 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.62■□□□□ 0.73
CD97P48960 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.62■□□□□ 0.73
CD97P48960 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.62■□□□□ 0.73
CD97P48960 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.62■□□□□ 0.73
CD97P48960 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD97P48960 AC010536.3-201ENST00000620306 533 ntBASIC19.62■□□□□ 0.73
CD97P48960 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CD97P48960 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.62■□□□□ 0.73
CD97P48960 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD97P48960 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD97P48960 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD97P48960 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CD97P48960 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.62■□□□□ 0.73
CD97P48960 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD97P48960 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD97P48960 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD97P48960 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.62■□□□□ 0.73
CD97P48960 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.61■□□□□ 0.73
CD97P48960 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD97P48960 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD97P48960 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD97P48960 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CD97P48960 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.61■□□□□ 0.73
CD97P48960 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.61■□□□□ 0.73
CD97P48960 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.61■□□□□ 0.73
CD97P48960 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.61■□□□□ 0.73
CD97P48960 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.61■□□□□ 0.73
CD97P48960 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.61■□□□□ 0.73
CD97P48960 AC105036.2-201ENST00000569468 176 ntBASIC19.61■□□□□ 0.73
CD97P48960 AC138907.5-202ENST00000569484 235 ntBASIC19.61■□□□□ 0.73
CD97P48960 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CD97P48960 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CD97P48960 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CD97P48960 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD97P48960 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CD97P48960 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.61■□□□□ 0.73
CD97P48960 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.61■□□□□ 0.73
CD97P48960 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD97P48960 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD97P48960 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.61■□□□□ 0.73
CD97P48960 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD97P48960 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CD97P48960 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD97P48960 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD97P48960 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.6■□□□□ 0.73
CD97P48960 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD97P48960 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD97P48960 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.6■□□□□ 0.73
CD97P48960 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.6■□□□□ 0.73
CD97P48960 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD97P48960 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.6■□□□□ 0.73
CD97P48960 AP006294.2-201ENST00000641667 209 ntBASIC19.6■□□□□ 0.73
CD97P48960 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD97P48960 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD97P48960 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CD97P48960 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD97P48960 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.6■□□□□ 0.73
CD97P48960 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.6■□□□□ 0.73
CD97P48960 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.6■□□□□ 0.73
CD97P48960 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CD97P48960 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD97P48960 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD97P48960 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.59■□□□□ 0.73
CD97P48960 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms