Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A6P48664 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A6P48664 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SLC1A6P48664 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
SLC1A6P48664 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SLC1A6P48664 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A6P48664 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A6P48664 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A6P48664 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A6P48664 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A6P48664 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC1A6P48664 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A6P48664 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A6P48664 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A6P48664 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A6P48664 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A6P48664 AC092720.2-201ENST00000602388 1665 ntBASIC20.19■□□□□ 0.82
SLC1A6P48664 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC1A6P48664 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC1A6P48664 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SLC1A6P48664 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC1A6P48664 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC1A6P48664 AP004607.4-201ENST00000530158 1459 ntBASIC20.19■□□□□ 0.82
SLC1A6P48664 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC1A6P48664 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
SLC1A6P48664 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC1A6P48664 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC1A6P48664 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC1A6P48664 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC1A6P48664 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SLC1A6P48664 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SLC1A6P48664 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC1A6P48664 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC1A6P48664 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC1A6P48664 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC1A6P48664 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC1A6P48664 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SLC1A6P48664 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC1A6P48664 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC1A6P48664 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC1A6P48664 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC1A6P48664 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC1A6P48664 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC1A6P48664 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC1A6P48664 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC1A6P48664 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC1A6P48664 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
SLC1A6P48664 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC1A6P48664 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC1A6P48664 TCF3P1-201ENST00000423021 1937 ntBASIC20.18■□□□□ 0.82
SLC1A6P48664 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC1A6P48664 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC1A6P48664 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.18■□□□□ 0.82
SLC1A6P48664 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC1A6P48664 AC105233.4-201ENST00000642045 216 ntBASIC20.18■□□□□ 0.82
SLC1A6P48664 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC1A6P48664 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC1A6P48664 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC1A6P48664 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC1A6P48664 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SLC1A6P48664 AC061975.6-201ENST00000579045 1553 ntBASIC20.17■□□□□ 0.82
SLC1A6P48664 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
SLC1A6P48664 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC1A6P48664 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.17■□□□□ 0.82
SLC1A6P48664 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.17■□□□□ 0.82
SLC1A6P48664 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC1A6P48664 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC1A6P48664 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC1A6P48664 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC1A6P48664 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC1A6P48664 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC1A6P48664 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC1A6P48664 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SLC1A6P48664 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
SLC1A6P48664 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC1A6P48664 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC1A6P48664 UNC93B3-201ENST00000308076 687 ntBASIC20.16■□□□□ 0.82
SLC1A6P48664 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC1A6P48664 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC1A6P48664 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC1A6P48664 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.16■□□□□ 0.82
SLC1A6P48664 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.16■□□□□ 0.82
SLC1A6P48664 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC1A6P48664 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC1A6P48664 EEF1DP3-203ENST00000566025 782 ntBASIC20.16■□□□□ 0.82
SLC1A6P48664 AC053503.5-201ENST00000601508 636 ntBASIC20.16■□□□□ 0.82
SLC1A6P48664 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC1A6P48664 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC1A6P48664 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC1A6P48664 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC1A6P48664 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC1A6P48664 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC1A6P48664 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC1A6P48664 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC1A6P48664 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC1A6P48664 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
SLC1A6P48664 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC1A6P48664 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.15■□□□□ 0.82
SLC1A6P48664 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.15■□□□□ 0.82
SLC1A6P48664 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms