Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
GABRA4P48169 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
GABRA4P48169 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GABRA4P48169 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
GABRA4P48169 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
GABRA4P48169 AC087633.2-202ENST00000565166 1439 ntBASIC19.58■□□□□ 0.72
GABRA4P48169 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GABRA4P48169 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.58■□□□□ 0.72
GABRA4P48169 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GABRA4P48169 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GABRA4P48169 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.57■□□□□ 0.72
GABRA4P48169 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GABRA4P48169 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
GABRA4P48169 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.57■□□□□ 0.72
GABRA4P48169 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
GABRA4P48169 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GABRA4P48169 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GABRA4P48169 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
GABRA4P48169 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.57■□□□□ 0.72
GABRA4P48169 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
GABRA4P48169 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.57■□□□□ 0.72
GABRA4P48169 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.57■□□□□ 0.72
GABRA4P48169 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.57■□□□□ 0.72
GABRA4P48169 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.57■□□□□ 0.72
GABRA4P48169 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.57■□□□□ 0.72
GABRA4P48169 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GABRA4P48169 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.57■□□□□ 0.72
GABRA4P48169 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.57■□□□□ 0.72
GABRA4P48169 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.57■□□□□ 0.72
GABRA4P48169 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
GABRA4P48169 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GABRA4P48169 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.56■□□□□ 0.72
GABRA4P48169 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.56■□□□□ 0.72
GABRA4P48169 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
GABRA4P48169 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GABRA4P48169 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GABRA4P48169 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GABRA4P48169 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.56■□□□□ 0.72
GABRA4P48169 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
GABRA4P48169 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.56■□□□□ 0.72
GABRA4P48169 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.56■□□□□ 0.72
GABRA4P48169 AC105020.6-201ENST00000621523 1217 ntBASIC19.56■□□□□ 0.72
GABRA4P48169 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.56■□□□□ 0.72
GABRA4P48169 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.56■□□□□ 0.72
GABRA4P48169 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.56■□□□□ 0.72
GABRA4P48169 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GABRA4P48169 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GABRA4P48169 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GABRA4P48169 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GABRA4P48169 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABRA4P48169 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABRA4P48169 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
GABRA4P48169 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABRA4P48169 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABRA4P48169 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.55■□□□□ 0.72
GABRA4P48169 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABRA4P48169 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.55■□□□□ 0.72
GABRA4P48169 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.55■□□□□ 0.72
GABRA4P48169 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GABRA4P48169 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.55■□□□□ 0.72
GABRA4P48169 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
GABRA4P48169 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.55■□□□□ 0.72
GABRA4P48169 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
GABRA4P48169 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABRA4P48169 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
GABRA4P48169 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GABRA4P48169 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GABRA4P48169 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GABRA4P48169 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GABRA4P48169 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.54■□□□□ 0.72
GABRA4P48169 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.54■□□□□ 0.72
GABRA4P48169 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GABRA4P48169 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GABRA4P48169 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GABRA4P48169 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GABRA4P48169 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GABRA4P48169 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
GABRA4P48169 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.53■□□□□ 0.72
GABRA4P48169 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.53■□□□□ 0.72
GABRA4P48169 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GABRA4P48169 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GABRA4P48169 TSPY20P-201ENST00000450910 630 ntBASIC19.53■□□□□ 0.72
GABRA4P48169 RNA5SP413-201ENST00000516373 109 ntBASIC19.53■□□□□ 0.72
GABRA4P48169 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.53■□□□□ 0.72
GABRA4P48169 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GABRA4P48169 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GABRA4P48169 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
GABRA4P48169 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.53■□□□□ 0.72
GABRA4P48169 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.53■□□□□ 0.72
GABRA4P48169 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.52■□□□□ 0.72
GABRA4P48169 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.52■□□□□ 0.72
GABRA4P48169 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.52■□□□□ 0.72
GABRA4P48169 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.52■□□□□ 0.72
GABRA4P48169 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.52■□□□□ 0.72
GABRA4P48169 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GABRA4P48169 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.52■□□□□ 0.72
GABRA4P48169 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GABRA4P48169 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GABRA4P48169 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.52■□□□□ 0.72
GABRA4P48169 AC026310.3-201ENST00000625186 2373 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms