Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC1A1P43005 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC1A1P43005 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC1A1P43005 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.53■■□□□ 1.04
SLC1A1P43005 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC1A1P43005 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC1A1P43005 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.53■■□□□ 1.04
SLC1A1P43005 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC1A1P43005 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.53■■□□□ 1.04
SLC1A1P43005 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC1A1P43005 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC1A1P43005 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC1A1P43005 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC1A1P43005 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC1A1P43005 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC1A1P43005 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.52■■□□□ 1.04
SLC1A1P43005 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLC1A1P43005 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
SLC1A1P43005 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SLC1A1P43005 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLC1A1P43005 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC1A1P43005 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC1A1P43005 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.52■■□□□ 1.04
SLC1A1P43005 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC1A1P43005 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC1A1P43005 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.52■■□□□ 1.04
SLC1A1P43005 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC1A1P43005 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC1A1P43005 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC1A1P43005 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
SLC1A1P43005 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SLC1A1P43005 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
SLC1A1P43005 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.52■■□□□ 1.03
SLC1A1P43005 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SLC1A1P43005 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.51■■□□□ 1.03
SLC1A1P43005 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SLC1A1P43005 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SLC1A1P43005 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC1A1P43005 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SLC1A1P43005 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC1A1P43005 AC092720.2-201ENST00000602388 1665 ntBASIC21.51■■□□□ 1.03
SLC1A1P43005 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC1A1P43005 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC1A1P43005 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC1A1P43005 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC1A1P43005 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC1A1P43005 AL121603.2-201ENST00000557373 2117 ntBASIC21.51■■□□□ 1.03
SLC1A1P43005 SLC7A5P1-201ENST00000568957 537 ntBASIC21.51■■□□□ 1.03
SLC1A1P43005 AC243732.1-201ENST00000612648 864 ntBASIC21.51■■□□□ 1.03
SLC1A1P43005 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.51■■□□□ 1.03
SLC1A1P43005 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.51■■□□□ 1.03
SLC1A1P43005 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC1A1P43005 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC1A1P43005 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC1A1P43005 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC1A1P43005 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC1A1P43005 AL512408.1-201ENST00000569378 2000 ntBASIC21.51■■□□□ 1.03
SLC1A1P43005 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SLC1A1P43005 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
SLC1A1P43005 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC1A1P43005 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
SLC1A1P43005 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SLC1A1P43005 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC1A1P43005 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC1A1P43005 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC1A1P43005 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.5■■□□□ 1.03
SLC1A1P43005 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.5■■□□□ 1.03
SLC1A1P43005 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.5■■□□□ 1.03
SLC1A1P43005 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC1A1P43005 KRT18P14-201ENST00000534205 1250 ntBASIC21.5■■□□□ 1.03
SLC1A1P43005 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.5■■□□□ 1.03
SLC1A1P43005 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.5■■□□□ 1.03
SLC1A1P43005 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SLC1A1P43005 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC1A1P43005 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLC1A1P43005 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC1A1P43005 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SLC1A1P43005 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.49■■□□□ 1.03
SLC1A1P43005 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC1A1P43005 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.49■■□□□ 1.03
SLC1A1P43005 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.49■■□□□ 1.03
SLC1A1P43005 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.49■■□□□ 1.03
SLC1A1P43005 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC1A1P43005 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC1A1P43005 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SLC1A1P43005 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC1A1P43005 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SLC1A1P43005 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.49■■□□□ 1.03
SLC1A1P43005 MIR2861-201ENST00000636310 90 ntBASIC21.49■■□□□ 1.03
SLC1A1P43005 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
SLC1A1P43005 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLC1A1P43005 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.49■■□□□ 1.03
SLC1A1P43005 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC1A1P43005 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.49■■□□□ 1.03
SLC1A1P43005 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC1A1P43005 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SLC1A1P43005 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.48■■□□□ 1.03
SLC1A1P43005 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.48■■□□□ 1.03
SLC1A1P43005 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC1A1P43005 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms