Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC26.26■■□□□ 1.79
COL15A1P39059 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
COL15A1P39059 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC26.26■■□□□ 1.79
COL15A1P39059 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL15A1P39059 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
COL15A1P39059 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.26■■□□□ 1.79
COL15A1P39059 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL15A1P39059 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL15A1P39059 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL15A1P39059 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL15A1P39059 GXYLT1P3-201ENST00000453058 1193 ntBASIC26.25■■□□□ 1.79
COL15A1P39059 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL15A1P39059 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL15A1P39059 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL15A1P39059 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL15A1P39059 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
COL15A1P39059 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
COL15A1P39059 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
COL15A1P39059 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
COL15A1P39059 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL15A1P39059 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL15A1P39059 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL15A1P39059 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
COL15A1P39059 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
COL15A1P39059 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
COL15A1P39059 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL15A1P39059 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL15A1P39059 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL15A1P39059 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC26.24■■□□□ 1.79
COL15A1P39059 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
COL15A1P39059 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL15A1P39059 AC116050.2-201ENST00000612102 1779 ntBASIC26.24■■□□□ 1.79
COL15A1P39059 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL15A1P39059 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL15A1P39059 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL15A1P39059 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL15A1P39059 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL15A1P39059 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL15A1P39059 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
COL15A1P39059 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
COL15A1P39059 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC26.23■■□□□ 1.79
COL15A1P39059 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC26.23■■□□□ 1.79
COL15A1P39059 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL15A1P39059 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL15A1P39059 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL15A1P39059 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL15A1P39059 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
COL15A1P39059 ISG20-202ENST00000379224 540 ntTSL 3 BASIC26.22■■□□□ 1.79
COL15A1P39059 ECEL1P3-201ENST00000427961 737 ntBASIC26.22■■□□□ 1.79
COL15A1P39059 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL15A1P39059 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL15A1P39059 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
COL15A1P39059 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC26.22■■□□□ 1.79
COL15A1P39059 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC26.22■■□□□ 1.79
COL15A1P39059 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL15A1P39059 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
COL15A1P39059 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL15A1P39059 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL15A1P39059 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC26.22■■□□□ 1.79
COL15A1P39059 MFF-203ENST00000349901 1716 ntTSL 2 BASIC26.22■■□□□ 1.79
COL15A1P39059 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
COL15A1P39059 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
COL15A1P39059 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL15A1P39059 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC26.21■■□□□ 1.79
COL15A1P39059 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL15A1P39059 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
COL15A1P39059 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
COL15A1P39059 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC26.21■■□□□ 1.79
COL15A1P39059 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL15A1P39059 AC087633.2-202ENST00000565166 1439 ntBASIC26.21■■□□□ 1.79
COL15A1P39059 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC26.21■■□□□ 1.79
COL15A1P39059 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL15A1P39059 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL15A1P39059 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
COL15A1P39059 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL15A1P39059 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
COL15A1P39059 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC26.2■■□□□ 1.79
COL15A1P39059 AC012618.2-201ENST00000428058 849 ntBASIC26.2■■□□□ 1.79
COL15A1P39059 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
COL15A1P39059 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
COL15A1P39059 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
COL15A1P39059 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
COL15A1P39059 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.79
COL15A1P39059 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL15A1P39059 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL15A1P39059 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
COL15A1P39059 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
COL15A1P39059 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC26.2■■□□□ 1.78
COL15A1P39059 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
COL15A1P39059 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
COL15A1P39059 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC26.2■■□□□ 1.78
COL15A1P39059 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC26.2■■□□□ 1.78
COL15A1P39059 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
COL15A1P39059 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
COL15A1P39059 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.78
COL15A1P39059 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC26.2■■□□□ 1.78
COL15A1P39059 C2orf69P4-201ENST00000565394 541 ntBASIC26.2■■□□□ 1.78
COL15A1P39059 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC26.2■■□□□ 1.78
COL15A1P39059 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
COL15A1P39059 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms