Protein–RNA interactions for Protein: P36954

POLR2I, DNA-directed RNA polymerase II subunit RPB9, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2IP36954 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2IP36954 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
POLR2IP36954 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2IP36954 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.92■□□□□ 0.62
POLR2IP36954 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
POLR2IP36954 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
POLR2IP36954 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.92■□□□□ 0.62
POLR2IP36954 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2IP36954 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.92■□□□□ 0.62
POLR2IP36954 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.92■□□□□ 0.62
POLR2IP36954 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.92■□□□□ 0.62
POLR2IP36954 BX005040.4-201ENST00000637145 1518 ntBASIC18.92■□□□□ 0.62
POLR2IP36954 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2IP36954 SLC47A1P1-202ENST00000449666 945 ntBASIC18.92■□□□□ 0.62
POLR2IP36954 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2IP36954 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.92■□□□□ 0.62
POLR2IP36954 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.92■□□□□ 0.62
POLR2IP36954 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.92■□□□□ 0.62
POLR2IP36954 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.92■□□□□ 0.62
POLR2IP36954 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2IP36954 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.92■□□□□ 0.62
POLR2IP36954 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2IP36954 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2IP36954 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2IP36954 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2IP36954 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2IP36954 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2IP36954 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
POLR2IP36954 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2IP36954 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2IP36954 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2IP36954 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.91■□□□□ 0.62
POLR2IP36954 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.91■□□□□ 0.62
POLR2IP36954 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2IP36954 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.91■□□□□ 0.62
POLR2IP36954 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2IP36954 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
POLR2IP36954 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.91■□□□□ 0.62
POLR2IP36954 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.91■□□□□ 0.62
POLR2IP36954 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.91■□□□□ 0.62
POLR2IP36954 SMUG1P1-201ENST00000590640 811 ntBASIC18.91■□□□□ 0.62
POLR2IP36954 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.91■□□□□ 0.62
POLR2IP36954 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.91■□□□□ 0.62
POLR2IP36954 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.91■□□□□ 0.62
POLR2IP36954 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
POLR2IP36954 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2IP36954 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2IP36954 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2IP36954 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2IP36954 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2IP36954 AL158211.5-201ENST00000623583 2518 ntBASIC18.91■□□□□ 0.62
POLR2IP36954 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2IP36954 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.9■□□□□ 0.62
POLR2IP36954 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
POLR2IP36954 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2IP36954 RARRES2P1-201ENST00000474487 481 ntBASIC18.9■□□□□ 0.62
POLR2IP36954 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.9■□□□□ 0.62
POLR2IP36954 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.9■□□□□ 0.62
POLR2IP36954 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
POLR2IP36954 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.9■□□□□ 0.62
POLR2IP36954 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2IP36954 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2IP36954 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
POLR2IP36954 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.9■□□□□ 0.62
POLR2IP36954 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
POLR2IP36954 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
POLR2IP36954 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.89■□□□□ 0.62
POLR2IP36954 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
POLR2IP36954 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
POLR2IP36954 SYT6-210ENST00000641643 1587 ntBASIC18.89■□□□□ 0.62
POLR2IP36954 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
POLR2IP36954 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
POLR2IP36954 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.89■□□□□ 0.61
POLR2IP36954 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2IP36954 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.89■□□□□ 0.61
POLR2IP36954 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2IP36954 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
POLR2IP36954 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2IP36954 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2IP36954 SERBP1P1-201ENST00000396021 1160 ntBASIC18.89■□□□□ 0.61
POLR2IP36954 KRT16P3-201ENST00000439127 1283 ntBASIC18.89■□□□□ 0.61
POLR2IP36954 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.89■□□□□ 0.61
POLR2IP36954 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.89■□□□□ 0.61
POLR2IP36954 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.89■□□□□ 0.61
POLR2IP36954 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2IP36954 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2IP36954 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2IP36954 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
POLR2IP36954 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2IP36954 AC026471.1-201ENST00000564629 3026 ntBASIC18.89■□□□□ 0.61
POLR2IP36954 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2IP36954 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2IP36954 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
POLR2IP36954 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2IP36954 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.88■□□□□ 0.61
POLR2IP36954 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2IP36954 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
POLR2IP36954 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.88■□□□□ 0.61
POLR2IP36954 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
POLR2IP36954 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms