Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.32■■□□□ 1.32
CLCN1P35523 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLCN1P35523 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLCN1P35523 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.32■■□□□ 1.32
CLCN1P35523 AC020907.5-201ENST00000624372 1936 ntBASIC23.32■■□□□ 1.32
CLCN1P35523 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CLCN1P35523 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CLCN1P35523 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CLCN1P35523 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
CLCN1P35523 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CLCN1P35523 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLCN1P35523 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLCN1P35523 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN1P35523 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN1P35523 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN1P35523 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.31■■□□□ 1.32
CLCN1P35523 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN1P35523 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN1P35523 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN1P35523 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.31■■□□□ 1.32
CLCN1P35523 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.31■■□□□ 1.32
CLCN1P35523 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.31■■□□□ 1.32
CLCN1P35523 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN1P35523 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN1P35523 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.31■■□□□ 1.32
CLCN1P35523 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
CLCN1P35523 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN1P35523 AL158211.5-201ENST00000623583 2518 ntBASIC23.31■■□□□ 1.32
CLCN1P35523 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN1P35523 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN1P35523 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN1P35523 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC23.3■■□□□ 1.32
CLCN1P35523 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.3■■□□□ 1.32
CLCN1P35523 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
CLCN1P35523 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CLCN1P35523 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN1P35523 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN1P35523 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN1P35523 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CLCN1P35523 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.3■■□□□ 1.32
CLCN1P35523 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN1P35523 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.3■■□□□ 1.32
CLCN1P35523 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN1P35523 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN1P35523 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN1P35523 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN1P35523 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN1P35523 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN1P35523 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC23.3■■□□□ 1.32
CLCN1P35523 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN1P35523 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN1P35523 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN1P35523 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC23.3■■□□□ 1.32
CLCN1P35523 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
CLCN1P35523 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLCN1P35523 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CLCN1P35523 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLCN1P35523 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CLCN1P35523 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
CLCN1P35523 AR-207ENST00000612010 3896 ntTSL 5 BASIC23.29■■□□□ 1.32
CLCN1P35523 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.29■■□□□ 1.32
CLCN1P35523 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLCN1P35523 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLCN1P35523 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.29■■□□□ 1.32
CLCN1P35523 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CLCN1P35523 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CLCN1P35523 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.29■■□□□ 1.32
CLCN1P35523 AC011298.3-201ENST00000615796 283 ntBASIC23.29■■□□□ 1.32
CLCN1P35523 AC136469.2-201ENST00000623944 1028 ntBASIC23.29■■□□□ 1.32
CLCN1P35523 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.29■■□□□ 1.32
CLCN1P35523 AC026471.6-201ENST00000622954 1905 ntBASIC23.29■■□□□ 1.32
CLCN1P35523 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CLCN1P35523 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLCN1P35523 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.28■■□□□ 1.32
CLCN1P35523 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.28■■□□□ 1.32
CLCN1P35523 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN1P35523 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN1P35523 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN1P35523 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN1P35523 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.28■■□□□ 1.32
CLCN1P35523 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.28■■□□□ 1.32
CLCN1P35523 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN1P35523 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN1P35523 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN1P35523 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN1P35523 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN1P35523 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN1P35523 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CLCN1P35523 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.28■■□□□ 1.32
CLCN1P35523 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN1P35523 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN1P35523 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN1P35523 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.27■■□□□ 1.32
CLCN1P35523 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CLCN1P35523 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CLCN1P35523 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLCN1P35523 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLCN1P35523 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CLCN1P35523 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
CLCN1P35523 AC104564.3-201ENST00000582367 638 ntBASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms