Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTNNA1P35221 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.67■■□□□ 1.06
CTNNA1P35221 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTNNA1P35221 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTNNA1P35221 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CTNNA1P35221 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.67■■□□□ 1.06
CTNNA1P35221 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTNNA1P35221 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CTNNA1P35221 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTNNA1P35221 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTNNA1P35221 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTNNA1P35221 FP700111.2-201ENST00000619190 1892 ntBASIC21.66■■□□□ 1.06
CTNNA1P35221 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTNNA1P35221 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CTNNA1P35221 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTNNA1P35221 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTNNA1P35221 PCDHAC2-203ENST00000615316 3011 ntBASIC21.66■■□□□ 1.06
CTNNA1P35221 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTNNA1P35221 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTNNA1P35221 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTNNA1P35221 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.66■■□□□ 1.06
CTNNA1P35221 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.66■■□□□ 1.06
CTNNA1P35221 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTNNA1P35221 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTNNA1P35221 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTNNA1P35221 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTNNA1P35221 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.66■■□□□ 1.06
CTNNA1P35221 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTNNA1P35221 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.66■■□□□ 1.06
CTNNA1P35221 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTNNA1P35221 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTNNA1P35221 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTNNA1P35221 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.65■■□□□ 1.06
CTNNA1P35221 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.65■■□□□ 1.06
CTNNA1P35221 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTNNA1P35221 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTNNA1P35221 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTNNA1P35221 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.65■■□□□ 1.06
CTNNA1P35221 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTNNA1P35221 AL139246.5-201ENST00000606645 996 ntBASIC21.65■■□□□ 1.06
CTNNA1P35221 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTNNA1P35221 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
CTNNA1P35221 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.65■■□□□ 1.06
CTNNA1P35221 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.65■■□□□ 1.06
CTNNA1P35221 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTNNA1P35221 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTNNA1P35221 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CTNNA1P35221 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
CTNNA1P35221 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTNNA1P35221 KRT87P-202ENST00000534226 1464 ntBASIC21.64■■□□□ 1.06
CTNNA1P35221 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CTNNA1P35221 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CTNNA1P35221 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CTNNA1P35221 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CTNNA1P35221 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.64■■□□□ 1.06
CTNNA1P35221 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.64■■□□□ 1.05
CTNNA1P35221 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CTNNA1P35221 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CTNNA1P35221 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTNNA1P35221 POU5F1P4-201ENST00000413175 1085 ntBASIC21.64■■□□□ 1.05
CTNNA1P35221 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.64■■□□□ 1.05
CTNNA1P35221 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.64■■□□□ 1.05
CTNNA1P35221 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.64■■□□□ 1.05
CTNNA1P35221 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.64■■□□□ 1.05
CTNNA1P35221 MIR6084-201ENST00000622012 110 ntBASIC21.64■■□□□ 1.05
CTNNA1P35221 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTNNA1P35221 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTNNA1P35221 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CTNNA1P35221 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.64■■□□□ 1.05
CTNNA1P35221 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CTNNA1P35221 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTNNA1P35221 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTNNA1P35221 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CTNNA1P35221 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.64■■□□□ 1.05
CTNNA1P35221 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.63■■□□□ 1.05
CTNNA1P35221 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTNNA1P35221 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.63■■□□□ 1.05
CTNNA1P35221 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
CTNNA1P35221 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
CTNNA1P35221 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CTNNA1P35221 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.63■■□□□ 1.05
CTNNA1P35221 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNNA1P35221 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNNA1P35221 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTNNA1P35221 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNNA1P35221 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNNA1P35221 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNNA1P35221 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNNA1P35221 AC079140.4-201ENST00000507448 529 ntBASIC21.63■■□□□ 1.05
CTNNA1P35221 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.63■■□□□ 1.05
CTNNA1P35221 AC008175.2-201ENST00000612840 297 ntBASIC21.63■■□□□ 1.05
CTNNA1P35221 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNNA1P35221 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.63■■□□□ 1.05
CTNNA1P35221 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.63■■□□□ 1.05
CTNNA1P35221 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTNNA1P35221 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CTNNA1P35221 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNNA1P35221 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNNA1P35221 AFG3L1P-217ENST00000557444 2447 ntBASIC21.63■■□□□ 1.05
CTNNA1P35221 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms