Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHA3P29320 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHA3P29320 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.98■□□□□ 0.79
EPHA3P29320 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHA3P29320 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHA3P29320 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHA3P29320 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
EPHA3P29320 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EPHA3P29320 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
EPHA3P29320 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHA3P29320 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.98■□□□□ 0.79
EPHA3P29320 AC024257.2-201ENST00000549699 147 ntBASIC19.98■□□□□ 0.79
EPHA3P29320 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.98■□□□□ 0.79
EPHA3P29320 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.98■□□□□ 0.79
EPHA3P29320 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHA3P29320 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHA3P29320 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHA3P29320 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
EPHA3P29320 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
EPHA3P29320 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.98■□□□□ 0.79
EPHA3P29320 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHA3P29320 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHA3P29320 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.98■□□□□ 0.79
EPHA3P29320 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EPHA3P29320 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.97■□□□□ 0.79
EPHA3P29320 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
EPHA3P29320 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
EPHA3P29320 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EPHA3P29320 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.97■□□□□ 0.79
EPHA3P29320 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
EPHA3P29320 AC061975.6-201ENST00000579045 1553 ntBASIC19.97■□□□□ 0.79
EPHA3P29320 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
EPHA3P29320 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EPHA3P29320 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
EPHA3P29320 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.97■□□□□ 0.79
EPHA3P29320 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.97■□□□□ 0.79
EPHA3P29320 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
EPHA3P29320 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.97■□□□□ 0.79
EPHA3P29320 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EPHA3P29320 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
EPHA3P29320 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.97■□□□□ 0.79
EPHA3P29320 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.97■□□□□ 0.79
EPHA3P29320 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
EPHA3P29320 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHA3P29320 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHA3P29320 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
EPHA3P29320 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHA3P29320 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHA3P29320 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.96■□□□□ 0.79
EPHA3P29320 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.96■□□□□ 0.79
EPHA3P29320 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
EPHA3P29320 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
EPHA3P29320 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHA3P29320 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHA3P29320 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.96■□□□□ 0.79
EPHA3P29320 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.96■□□□□ 0.79
EPHA3P29320 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.96■□□□□ 0.79
EPHA3P29320 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
EPHA3P29320 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
EPHA3P29320 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.96■□□□□ 0.79
EPHA3P29320 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.96■□□□□ 0.79
EPHA3P29320 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.96■□□□□ 0.79
EPHA3P29320 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHA3P29320 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
EPHA3P29320 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
EPHA3P29320 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHA3P29320 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHA3P29320 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.95■□□□□ 0.78
EPHA3P29320 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHA3P29320 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
EPHA3P29320 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.95■□□□□ 0.78
EPHA3P29320 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHA3P29320 AP004607.4-201ENST00000530158 1459 ntBASIC19.95■□□□□ 0.78
EPHA3P29320 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
EPHA3P29320 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
EPHA3P29320 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.95■□□□□ 0.78
EPHA3P29320 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHA3P29320 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHA3P29320 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
EPHA3P29320 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.95■□□□□ 0.78
EPHA3P29320 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.95■□□□□ 0.78
EPHA3P29320 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.95■□□□□ 0.78
EPHA3P29320 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA3P29320 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA3P29320 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA3P29320 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA3P29320 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA3P29320 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA3P29320 AC087289.5-201ENST00000586076 3175 ntBASIC19.94■□□□□ 0.78
EPHA3P29320 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA3P29320 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA3P29320 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
EPHA3P29320 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA3P29320 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.94■□□□□ 0.78
EPHA3P29320 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.94■□□□□ 0.78
EPHA3P29320 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.94■□□□□ 0.78
EPHA3P29320 AC008764.7-201ENST00000593779 1081 ntBASIC19.94■□□□□ 0.78
EPHA3P29320 AL136162.1-201ENST00000607711 1078 ntBASIC19.94■□□□□ 0.78
EPHA3P29320 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
EPHA3P29320 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms