Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GDF1P27539 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GDF1P27539 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GDF1P27539 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GDF1P27539 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GDF1P27539 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
GDF1P27539 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GDF1P27539 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GDF1P27539 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GDF1P27539 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
GDF1P27539 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.67■□□□□ 0.58
GDF1P27539 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GDF1P27539 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GDF1P27539 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
GDF1P27539 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GDF1P27539 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GDF1P27539 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.67■□□□□ 0.58
GDF1P27539 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.67■□□□□ 0.58
GDF1P27539 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GDF1P27539 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.67■□□□□ 0.58
GDF1P27539 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GDF1P27539 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.67■□□□□ 0.58
GDF1P27539 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GDF1P27539 KRT17P1-201ENST00000399211 1546 ntBASIC18.67■□□□□ 0.58
GDF1P27539 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GDF1P27539 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GDF1P27539 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GDF1P27539 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.67■□□□□ 0.58
GDF1P27539 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GDF1P27539 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.67■□□□□ 0.58
GDF1P27539 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GDF1P27539 CYP21A1P-202ENST00000354927 1481 ntBASIC18.66■□□□□ 0.58
GDF1P27539 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GDF1P27539 LINC00565-201ENST00000562710 2331 ntBASIC18.66■□□□□ 0.58
GDF1P27539 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GDF1P27539 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.66■□□□□ 0.58
GDF1P27539 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.66■□□□□ 0.58
GDF1P27539 AC091874.3-201ENST00000512672 1195 ntBASIC18.66■□□□□ 0.58
GDF1P27539 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.66■□□□□ 0.58
GDF1P27539 AL589743.5-201ENST00000616611 1050 ntBASIC18.66■□□□□ 0.58
GDF1P27539 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
GDF1P27539 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
GDF1P27539 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GDF1P27539 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.66■□□□□ 0.58
GDF1P27539 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.66■□□□□ 0.58
GDF1P27539 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GDF1P27539 AL024507.2-201ENST00000606070 2574 ntBASIC18.66■□□□□ 0.58
GDF1P27539 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.66■□□□□ 0.58
GDF1P27539 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
GDF1P27539 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
GDF1P27539 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GDF1P27539 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.65■□□□□ 0.58
GDF1P27539 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GDF1P27539 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
GDF1P27539 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GDF1P27539 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GDF1P27539 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.65■□□□□ 0.58
GDF1P27539 KRT18P68-201ENST00000392293 1000 ntBASIC18.65■□□□□ 0.58
GDF1P27539 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GDF1P27539 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GDF1P27539 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GDF1P27539 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GDF1P27539 RNA5SP413-201ENST00000516373 109 ntBASIC18.65■□□□□ 0.58
GDF1P27539 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GDF1P27539 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.65■□□□□ 0.58
GDF1P27539 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.65■□□□□ 0.58
GDF1P27539 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.65■□□□□ 0.58
GDF1P27539 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.65■□□□□ 0.58
GDF1P27539 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GDF1P27539 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GDF1P27539 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GDF1P27539 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GDF1P27539 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GDF1P27539 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GDF1P27539 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
GDF1P27539 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GDF1P27539 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GDF1P27539 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GDF1P27539 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GDF1P27539 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GDF1P27539 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
GDF1P27539 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GDF1P27539 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.64■□□□□ 0.58
GDF1P27539 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GDF1P27539 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GDF1P27539 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.64■□□□□ 0.57
GDF1P27539 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
GDF1P27539 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
GDF1P27539 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GDF1P27539 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
GDF1P27539 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GDF1P27539 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.64■□□□□ 0.57
GDF1P27539 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.64■□□□□ 0.57
GDF1P27539 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.64■□□□□ 0.57
GDF1P27539 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GDF1P27539 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.64■□□□□ 0.57
GDF1P27539 AC079834.2-201ENST00000609776 1949 ntBASIC18.64■□□□□ 0.57
GDF1P27539 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GDF1P27539 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GDF1P27539 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms