Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPN3P26045 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPN3P26045 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN3P26045 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.99■□□□□ 0.95
PTPN3P26045 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PTPN3P26045 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPN3P26045 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN3P26045 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPN3P26045 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPN3P26045 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPN3P26045 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN3P26045 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN3P26045 AP005212.1-201ENST00000581547 1997 ntBASIC20.99■□□□□ 0.95
PTPN3P26045 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN3P26045 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN3P26045 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.98■□□□□ 0.95
PTPN3P26045 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PTPN3P26045 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PTPN3P26045 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN3P26045 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PTPN3P26045 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.98■□□□□ 0.95
PTPN3P26045 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN3P26045 KRT18P11-201ENST00000435214 1283 ntBASIC20.98■□□□□ 0.95
PTPN3P26045 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN3P26045 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN3P26045 AC010536.3-201ENST00000620306 533 ntBASIC20.98■□□□□ 0.95
PTPN3P26045 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PTPN3P26045 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN3P26045 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN3P26045 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN3P26045 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PTPN3P26045 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.98■□□□□ 0.95
PTPN3P26045 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PTPN3P26045 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.98■□□□□ 0.95
PTPN3P26045 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN3P26045 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PTPN3P26045 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN3P26045 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN3P26045 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN3P26045 TERF1P5-201ENST00000477545 1207 ntBASIC20.97■□□□□ 0.95
PTPN3P26045 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
PTPN3P26045 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN3P26045 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN3P26045 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PTPN3P26045 LINC01521-201ENST00000504184 1943 ntBASIC20.97■□□□□ 0.95
PTPN3P26045 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PTPN3P26045 AC092667.1-201ENST00000434301 2586 ntBASIC20.97■□□□□ 0.95
PTPN3P26045 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN3P26045 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN3P26045 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
PTPN3P26045 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN3P26045 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN3P26045 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PTPN3P26045 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN3P26045 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN3P26045 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPN3P26045 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN3P26045 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN3P26045 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN3P26045 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN3P26045 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN3P26045 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
PTPN3P26045 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPN3P26045 AC007322.3-201ENST00000426526 701 ntBASIC20.96■□□□□ 0.95
PTPN3P26045 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN3P26045 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN3P26045 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN3P26045 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN3P26045 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PTPN3P26045 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.96■□□□□ 0.95
PTPN3P26045 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN3P26045 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN3P26045 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN3P26045 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN3P26045 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN3P26045 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN3P26045 AL121603.2-201ENST00000557373 2117 ntBASIC20.95■□□□□ 0.94
PTPN3P26045 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN3P26045 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN3P26045 AC006015.1-201ENST00000429970 570 ntBASIC20.95■□□□□ 0.94
PTPN3P26045 MFSD11-216ENST00000590393 1141 ntBASIC20.95■□□□□ 0.94
PTPN3P26045 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.95■□□□□ 0.94
PTPN3P26045 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN3P26045 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.95■□□□□ 0.94
PTPN3P26045 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN3P26045 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN3P26045 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PTPN3P26045 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PTPN3P26045 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN3P26045 GABARAPL3-202ENST00000624044 1851 ntBASIC20.94■□□□□ 0.94
PTPN3P26045 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN3P26045 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN3P26045 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN3P26045 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PTPN3P26045 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN3P26045 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN3P26045 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN3P26045 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN3P26045 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN3P26045 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms