Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 YML084WYML084W 309 nt3.46□□□□□ -1.86
MSH2P25847 YOR053WYOR053W 342 nt3.46□□□□□ -1.86
MSH2P25847 NSL1YPL233W 651 nt3.46□□□□□ -1.86
MSH2P25847 FAR1YJL157C 2493 nt3.46□□□□□ -1.86
MSH2P25847 POM152YMR129W 4014 nt3.46□□□□□ -1.86
MSH2P25847 CCT7YJL111W 1653 nt3.46□□□□□ -1.86
MSH2P25847 PDC2YDR081C 2778 nt3.46□□□□□ -1.86
MSH2P25847 FUS1YCL027W 1539 nt3.45□□□□□ -1.86
MSH2P25847 DPB11YJL090C 2295 nt3.45□□□□□ -1.86
MSH2P25847 MET10YFR030W 3108 nt3.45□□□□□ -1.86
MSH2P25847 YNR063WYNR063W 1824 nt3.45□□□□□ -1.86
MSH2P25847 SWF1YDR126W 1011 nt3.45□□□□□ -1.86
MSH2P25847 YEL057CYEL057C 702 nt3.45□□□□□ -1.86
MSH2P25847 YER039C-AYER039C-A 219 nt3.45□□□□□ -1.86
MSH2P25847 YHL006W-AYHL006W-A 354 nt3.45□□□□□ -1.86
MSH2P25847 YIL030W-AYIL030W-A 339 nt3.45□□□□□ -1.86
MSH2P25847 TPM2YIL138C 486 nt3.45□□□□□ -1.86
MSH2P25847 RPB11YOL005C 363 nt3.45□□□□□ -1.86
MSH2P25847 PEP12YOR036W 867 nt3.45□□□□□ -1.86
MSH2P25847 DGK1YOR311C 873 nt3.45□□□□□ -1.86
MSH2P25847 MET5YJR137C 4329 nt3.45□□□□□ -1.86
MSH2P25847 RUD3YOR216C 1455 nt3.45□□□□□ -1.86
MSH2P25847 AI2Q0055 2565 nt3.45□□□□□ -1.86
MSH2P25847 SEN54YPL083C 1404 nt3.44□□□□□ -1.86
MSH2P25847 COG3YER157W 2406 nt3.44□□□□□ -1.86
MSH2P25847 YAK1YJL141C 2424 nt3.44□□□□□ -1.86
MSH2P25847 YHL009W-AYHL009W-A 1242 nt3.44□□□□□ -1.86
MSH2P25847 YJR079WYJR079W 330 nt3.44□□□□□ -1.86
MSH2P25847 IRC19YLL033W 693 nt3.44□□□□□ -1.86
MSH2P25847 YAL068W-AYAL068W-A 255 nt3.44□□□□□ -1.86
MSH2P25847 SIP18YMR175W 240 nt3.44□□□□□ -1.86
MSH2P25847 YOR392WYOR392W 444 nt3.44□□□□□ -1.86
MSH2P25847 VAS1YGR094W 3315 nt3.44□□□□□ -1.86
MSH2P25847 MDN1YLR106C 14733 nt3.44□□□□□ -1.86
MSH2P25847 STE6YKL209C 3873 nt3.44□□□□□ -1.86
MSH2P25847 DAS1YJL149W 1992 nt3.43□□□□□ -1.86
MSH2P25847 RNH70YGR276C 1662 nt3.43□□□□□ -1.86
MSH2P25847 MSR1YHR091C 1932 nt3.43□□□□□ -1.86
MSH2P25847 DUF1YOL087C 3351 nt3.43□□□□□ -1.86
MSH2P25847 YDR194W-AYDR194W-A 153 nt3.43□□□□□ -1.86
MSH2P25847 YMR31YFR049W 372 nt3.43□□□□□ -1.86
MSH2P25847 USE1YGL098W 738 nt3.43□□□□□ -1.86
MSH2P25847 YGL165CYGL165C 579 nt3.43□□□□□ -1.86
MSH2P25847 RPS21BYJL136C 264 nt3.43□□□□□ -1.86
MSH2P25847 TEN1YLR010C 483 nt3.43□□□□□ -1.86
MSH2P25847 YMR122W-AYMR122W-A 255 nt3.43□□□□□ -1.86
MSH2P25847 TSC3YBR058C-A 243 nt3.43□□□□□ -1.86
MSH2P25847 YBR285WYBR285W 435 nt3.43□□□□□ -1.86
MSH2P25847 MDM32YOR147W 1869 nt3.43□□□□□ -1.86
MSH2P25847 PFK26YIL107C 2484 nt3.43□□□□□ -1.86
MSH2P25847 YTA7YGR270W 4140 nt3.42□□□□□ -1.86
MSH2P25847 MBB1YJL199C 327 nt3.42□□□□□ -1.86
MSH2P25847 CRG1YHR209W 876 nt3.41□□□□□ -1.86
MSH2P25847 COA4YLR218C 453 nt3.41□□□□□ -1.86
MSH2P25847 CDC33YOL139C 642 nt3.41□□□□□ -1.86
MSH2P25847 YBR012CYBR012C 420 nt3.41□□□□□ -1.86
MSH2P25847 MAK21YDR060W 3078 nt3.41□□□□□ -1.86
MSH2P25847 YOL057WYOL057W 2136 nt3.41□□□□□ -1.86
MSH2P25847 PKH1YDR490C 2301 nt3.41□□□□□ -1.86
MSH2P25847 SIN3YOL004W 4611 nt3.4□□□□□ -1.86
MSH2P25847 SPB1YCL054W 2526 nt3.4□□□□□ -1.86
MSH2P25847 SHQ1YIL104C 1524 nt3.4□□□□□ -1.86
MSH2P25847 RPS17BYDR447C 411 nt3.4□□□□□ -1.87
MSH2P25847 GLC7YER133W 939 nt3.4□□□□□ -1.87
MSH2P25847 tK(UUU)DtK(UUU)D 73 nt3.4□□□□□ -1.87
MSH2P25847 tK(UUU)G1tK(UUU)G1 73 nt3.4□□□□□ -1.87
MSH2P25847 tK(UUU)G2tK(UUU)G2 73 nt3.4□□□□□ -1.87
MSH2P25847 tK(UUU)KtK(UUU)K 73 nt3.4□□□□□ -1.87
MSH2P25847 tK(UUU)LtK(UUU)L 73 nt3.4□□□□□ -1.87
MSH2P25847 tK(UUU)OtK(UUU)O 73 nt3.4□□□□□ -1.87
MSH2P25847 tK(UUU)PtK(UUU)P 73 nt3.4□□□□□ -1.87
MSH2P25847 YKL066WYKL066W 444 nt3.4□□□□□ -1.87
MSH2P25847 PEX17YNL214W 600 nt3.4□□□□□ -1.87
MSH2P25847 YOL134CYOL134C 390 nt3.4□□□□□ -1.87
MSH2P25847 SLM6YBR266C 453 nt3.4□□□□□ -1.87
MSH2P25847 ROY1YMR258C 1662 nt3.39□□□□□ -1.87
MSH2P25847 APC2YLR127C 2562 nt3.39□□□□□ -1.87
MSH2P25847 RMT2YDR465C 1239 nt3.39□□□□□ -1.87
MSH2P25847 RTR1YER139C 681 nt3.39□□□□□ -1.87
MSH2P25847 BAT1YHR208W 1182 nt3.39□□□□□ -1.87
MSH2P25847 YHR214W-AYHR214W-A 486 nt3.39□□□□□ -1.87
MSH2P25847 YAR068WYAR068W 486 nt3.39□□□□□ -1.87
MSH2P25847 LEU3YLR451W 2661 nt3.39□□□□□ -1.87
MSH2P25847 RLF2YPR018W 1821 nt3.39□□□□□ -1.87
MSH2P25847 TCP1YDR212W 1680 nt3.39□□□□□ -1.87
MSH2P25847 ROM1YGR070W 3468 nt3.39□□□□□ -1.87
MSH2P25847 NDT80YHR124W 1884 nt3.39□□□□□ -1.87
MSH2P25847 STU2YLR045C 2667 nt3.38□□□□□ -1.87
MSH2P25847 RRP5YMR229C 5190 nt3.38□□□□□ -1.87
MSH2P25847 DRS2YAL026C 4068 nt3.38□□□□□ -1.87
MSH2P25847 YEL018C-AYEL018C-A 534 nt3.38□□□□□ -1.87
MSH2P25847 YGR121W-AYGR121W-A 216 nt3.38□□□□□ -1.87
MSH2P25847 DLS1YJL065C 504 nt3.38□□□□□ -1.87
MSH2P25847 YJR140W-AYJR140W-A 150 nt3.38□□□□□ -1.87
MSH2P25847 YKL111CYKL111C 336 nt3.38□□□□□ -1.87
MSH2P25847 RPL8BYLL045C 771 nt3.38□□□□□ -1.87
MSH2P25847 URA10YMR271C 684 nt3.38□□□□□ -1.87
MSH2P25847 YNL034WYNL034W 1839 nt3.37□□□□□ -1.87
MSH2P25847 DSE4YNR067C 3354 nt3.37□□□□□ -1.87
MSH2P25847 YAT2YER024W 2772 nt3.37□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 83.4 ms