Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 RPL20AYMR242C 519 nt3.07□□□□□ -1.92
MSH1P25846 YNR021WYNR021W 1215 nt3.07□□□□□ -1.92
MSH1P25846 RRD2YPL152W 1077 nt3.07□□□□□ -1.92
MSH1P25846 ASM4YDL088C 1587 nt3.07□□□□□ -1.92
MSH1P25846 VAC8YEL013W 1737 nt3.07□□□□□ -1.92
MSH1P25846 SNF12YNR023W 1701 nt3.07□□□□□ -1.92
MSH1P25846 SIP3YNL257C 3690 nt3.06□□□□□ -1.92
MSH1P25846 FLO11YIR019C 4104 nt3.06□□□□□ -1.92
MSH1P25846 SAP1YER047C 2694 nt3.06□□□□□ -1.92
MSH1P25846 RPL29YFR032C-A 180 nt3.06□□□□□ -1.92
MSH1P25846 FYV4YHR059W 393 nt3.06□□□□□ -1.92
MSH1P25846 SEN15YMR059W 387 nt3.06□□□□□ -1.92
MSH1P25846 SAS2YMR127C 1017 nt3.06□□□□□ -1.92
MSH1P25846 YNL146C-AYNL146C-A 195 nt3.06□□□□□ -1.92
MSH1P25846 LCL1YPL056C 306 nt3.06□□□□□ -1.92
MSH1P25846 UBP16YPL072W 1500 nt3.06□□□□□ -1.92
MSH1P25846 ISU1YPL135W 498 nt3.06□□□□□ -1.92
MSH1P25846 COG3YER157W 2406 nt3.05□□□□□ -1.92
MSH1P25846 BMH2YDR099W 822 nt3.05□□□□□ -1.92
MSH1P25846 GIM4YEL003W 336 nt3.05□□□□□ -1.92
MSH1P25846 ERV1YGR029W 570 nt3.05□□□□□ -1.92
MSH1P25846 YHL005CYHL005C 393 nt3.05□□□□□ -1.92
MSH1P25846 YHR130CYHR130C 336 nt3.05□□□□□ -1.92
MSH1P25846 PBI2YNL015W 228 nt3.05□□□□□ -1.92
MSH1P25846 FRE2YKL220C 2136 nt3.05□□□□□ -1.92
MSH1P25846 YPL216WYPL216W 3309 nt3.04□□□□□ -1.92
MSH1P25846 RSN1YMR266W 2862 nt3.04□□□□□ -1.92
MSH1P25846 TRM2YKR056W 1920 nt3.04□□□□□ -1.92
MSH1P25846 YDL032WYDL032W 312 nt3.04□□□□□ -1.92
MSH1P25846 YDR524W-CYDR524W-C 90 nt3.04□□□□□ -1.92
MSH1P25846 YER038W-AYER038W-A 381 nt3.04□□□□□ -1.92
MSH1P25846 RPL14BYHL001W 417 nt3.04□□□□□ -1.92
MSH1P25846 YAP3YHL009C 993 nt3.04□□□□□ -1.92
MSH1P25846 SYM1YLR251W 594 nt3.04□□□□□ -1.92
MSH1P25846 CTK3YML112W 891 nt3.04□□□□□ -1.92
MSH1P25846 RPB5YBR154C 648 nt3.04□□□□□ -1.92
MSH1P25846 RTT10YPL183C 3042 nt3.04□□□□□ -1.92
MSH1P25846 PSY2YNL201C 2577 nt3.04□□□□□ -1.92
MSH1P25846 RLF2YPR018W 1821 nt3.03□□□□□ -1.92
MSH1P25846 GPI19YDR437W 423 nt3.03□□□□□ -1.92
MSH1P25846 COX13YGL191W 390 nt3.03□□□□□ -1.92
MSH1P25846 RPL8BYLL045C 771 nt3.03□□□□□ -1.92
MSH1P25846 YLR334CYLR334C 381 nt3.03□□□□□ -1.92
MSH1P25846 YBR076C-AYBR076C-A 267 nt3.03□□□□□ -1.92
MSH1P25846 RGC1YPR115W 3252 nt3.03□□□□□ -1.92
MSH1P25846 IKI3YLR384C 4050 nt3.03□□□□□ -1.92
MSH1P25846 NPR1YNL183C 2373 nt3.03□□□□□ -1.92
MSH1P25846 SRO77YBL106C 3033 nt3.03□□□□□ -1.92
MSH1P25846 PRP8YHR165C 7242 nt3.02□□□□□ -1.93
MSH1P25846 NET1YJL076W 3570 nt3.02□□□□□ -1.93
MSH1P25846 AI2Q0055 2565 nt3.02□□□□□ -1.93
MSH1P25846 MRH1YDR033W 963 nt3.02□□□□□ -1.93
MSH1P25846 BNA7YDR428C 786 nt3.02□□□□□ -1.93
MSH1P25846 LAG1YHL003C 1236 nt3.02□□□□□ -1.93
MSH1P25846 YIL174WYIL174W 228 nt3.02□□□□□ -1.93
MSH1P25846 YJL222W-AYJL222W-A 228 nt3.02□□□□□ -1.93
MSH1P25846 LSM2YBL026W 288 nt3.02□□□□□ -1.93
MSH1P25846 GPI15YNL038W 690 nt3.02□□□□□ -1.93
MSH1P25846 YNL046WYNL046W 519 nt3.02□□□□□ -1.93
MSH1P25846 YNL324WYNL324W 396 nt3.02□□□□□ -1.93
MSH1P25846 HSP10YOR020C 321 nt3.02□□□□□ -1.93
MSH1P25846 PEP12YOR036W 867 nt3.02□□□□□ -1.93
MSH1P25846 CAT5YOR125C 702 nt3.02□□□□□ -1.93
MSH1P25846 PRM3YPL192C 402 nt3.02□□□□□ -1.93
MSH1P25846 YPL261CYPL261C 309 nt3.02□□□□□ -1.93
MSH1P25846 YPR012WYPR012W 255 nt3.02□□□□□ -1.93
MSH1P25846 ARR2YPR200C 393 nt3.02□□□□□ -1.93
MSH1P25846 GYP7YDL234C 2241 nt3.02□□□□□ -1.93
MSH1P25846 SPB1YCL054W 2526 nt3.02□□□□□ -1.93
MSH1P25846 BPT1YLL015W 4680 nt3.02□□□□□ -1.93
MSH1P25846 YOR192C-AYOR192C-A 1317 nt3.01□□□□□ -1.93
MSH1P25846 GDS1YOR355W 1569 nt3.01□□□□□ -1.93
MSH1P25846 RTR2YDR066C 591 nt3.01□□□□□ -1.93
MSH1P25846 RPS17BYDR447C 411 nt3.01□□□□□ -1.93
MSH1P25846 YER084W-AYER084W-A 513 nt3.01□□□□□ -1.93
MSH1P25846 YGR107WYGR107W 450 nt3.01□□□□□ -1.93
MSH1P25846 YLR171WYLR171W 390 nt3.01□□□□□ -1.93
MSH1P25846 YMR316C-AYMR316C-A 312 nt3.01□□□□□ -1.93
MSH1P25846 TOM22YNL131W 459 nt3.01□□□□□ -1.93
MSH1P25846 YPR050CYPR050C 414 nt3.01□□□□□ -1.93
MSH1P25846 YBR085C-AYBR085C-A 258 nt3.01□□□□□ -1.93
MSH1P25846 SEC7YDR170C 6030 nt3□□□□□ -1.93
MSH1P25846 DBP10YDL031W 2988 nt3□□□□□ -1.93
MSH1P25846 PPH3YDR075W 927 nt3□□□□□ -1.93
MSH1P25846 ADK1YDR226W 669 nt3□□□□□ -1.93
MSH1P25846 TSA2YDR453C 591 nt3□□□□□ -1.93
MSH1P25846 HPA3YEL066W 540 nt3□□□□□ -1.93
MSH1P25846 AST2YER101C 1293 nt3□□□□□ -1.93
MSH1P25846 YLR012CYLR012C 300 nt3□□□□□ -1.93
MSH1P25846 YLR406C-AYLR406C-A 150 nt3□□□□□ -1.93
MSH1P25846 NSL1YPL233W 651 nt3□□□□□ -1.93
MSH1P25846 SPO23YBR250W 1572 nt3□□□□□ -1.93
MSH1P25846 YDR157WYDR157W 402 nt2.99□□□□□ -1.93
MSH1P25846 TIF35YDR429C 825 nt2.99□□□□□ -1.93
MSH1P25846 RAD6YGL058W 519 nt2.99□□□□□ -1.93
MSH1P25846 YLR154W-FYLR154W-F 141 nt2.99□□□□□ -1.93
MSH1P25846 AXL1YPR122W 3627 nt2.99□□□□□ -1.93
MSH1P25846 SLH1YGR271W 5904 nt2.99□□□□□ -1.93
MSH1P25846 ILS1YBL076C 3219 nt2.98□□□□□ -1.93
MSH1P25846 YAP6YDR259C 1152 nt2.98□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms