Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TNFSF4P23510 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.58■□□□□ 0.4
TNFSF4P23510 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.58■□□□□ 0.4
TNFSF4P23510 RAP2CP1-201ENST00000605103 478 ntBASIC17.58■□□□□ 0.4
TNFSF4P23510 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TNFSF4P23510 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TNFSF4P23510 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.58■□□□□ 0.4
TNFSF4P23510 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TNFSF4P23510 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TNFSF4P23510 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TNFSF4P23510 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TNFSF4P23510 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.58■□□□□ 0.4
TNFSF4P23510 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TNFSF4P23510 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TNFSF4P23510 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF4P23510 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF4P23510 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.57■□□□□ 0.4
TNFSF4P23510 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF4P23510 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF4P23510 AC068338.2-201ENST00000563278 1430 ntBASIC17.57■□□□□ 0.4
TNFSF4P23510 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
TNFSF4P23510 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF4P23510 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.57■□□□□ 0.4
TNFSF4P23510 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF4P23510 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.57■□□□□ 0.4
TNFSF4P23510 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF4P23510 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF4P23510 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.57■□□□□ 0.4
TNFSF4P23510 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TNFSF4P23510 CYP2T1P-201ENST00000432607 1285 ntBASIC17.57■□□□□ 0.4
TNFSF4P23510 OR10C1-204ENST00000622521 1039 ntBASIC17.57■□□□□ 0.4
TNFSF4P23510 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF4P23510 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TNFSF4P23510 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.57■□□□□ 0.4
TNFSF4P23510 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF4P23510 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.57■□□□□ 0.4
TNFSF4P23510 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TNFSF4P23510 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TNFSF4P23510 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF4P23510 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF4P23510 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.56■□□□□ 0.4
TNFSF4P23510 AC138932.1-201ENST00000534164 6830 ntBASIC17.56■□□□□ 0.4
TNFSF4P23510 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
TNFSF4P23510 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF4P23510 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.56■□□□□ 0.4
TNFSF4P23510 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.56■□□□□ 0.4
TNFSF4P23510 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.56■□□□□ 0.4
TNFSF4P23510 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.56■□□□□ 0.4
TNFSF4P23510 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF4P23510 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
TNFSF4P23510 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF4P23510 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.56■□□□□ 0.4
TNFSF4P23510 FAM21FP-204ENST00000608637 956 ntBASIC17.56■□□□□ 0.4
TNFSF4P23510 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TNFSF4P23510 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF4P23510 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TNFSF4P23510 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFSF4P23510 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.56■□□□□ 0.4
TNFSF4P23510 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.55■□□□□ 0.4
TNFSF4P23510 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF4P23510 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF4P23510 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TNFSF4P23510 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF4P23510 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF4P23510 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.55■□□□□ 0.4
TNFSF4P23510 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.55■□□□□ 0.4
TNFSF4P23510 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF4P23510 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF4P23510 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.55■□□□□ 0.4
TNFSF4P23510 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.55■□□□□ 0.4
TNFSF4P23510 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF4P23510 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.55■□□□□ 0.4
TNFSF4P23510 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TNFSF4P23510 AL049796.1-201ENST00000565336 1766 ntBASIC17.55■□□□□ 0.4
TNFSF4P23510 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF4P23510 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.55■□□□□ 0.4
TNFSF4P23510 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF4P23510 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TNFSF4P23510 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF4P23510 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF4P23510 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF4P23510 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF4P23510 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF4P23510 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.54■□□□□ 0.4
TNFSF4P23510 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TNFSF4P23510 CROCCP5-201ENST00000436658 830 ntBASIC17.54■□□□□ 0.4
TNFSF4P23510 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.54■□□□□ 0.4
TNFSF4P23510 AF201337.1-201ENST00000520239 748 ntBASIC17.54■□□□□ 0.4
TNFSF4P23510 AC133552.2-202ENST00000575694 574 ntBASIC17.54■□□□□ 0.4
TNFSF4P23510 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TNFSF4P23510 AL121832.2-201ENST00000610979 668 ntBASIC17.54■□□□□ 0.4
TNFSF4P23510 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFSF4P23510 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFSF4P23510 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFSF4P23510 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF4P23510 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TNFSF4P23510 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF4P23510 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF4P23510 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF4P23510 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms