Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR4A1P22736 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NR4A1P22736 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR4A1P22736 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR4A1P22736 GRAMD4P2-201ENST00000423297 1097 ntBASIC19■□□□□ 0.63
NR4A1P22736 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR4A1P22736 AC105265.2-201ENST00000467189 838 ntBASIC19■□□□□ 0.63
NR4A1P22736 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19■□□□□ 0.63
NR4A1P22736 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19■□□□□ 0.63
NR4A1P22736 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR4A1P22736 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
NR4A1P22736 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19■□□□□ 0.63
NR4A1P22736 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR4A1P22736 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NR4A1P22736 AC098818.2-201ENST00000564925 2320 ntBASIC19■□□□□ 0.63
NR4A1P22736 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
NR4A1P22736 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR4A1P22736 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR4A1P22736 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NR4A1P22736 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR4A1P22736 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR4A1P22736 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR4A1P22736 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
NR4A1P22736 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR4A1P22736 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR4A1P22736 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR4A1P22736 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
NR4A1P22736 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR4A1P22736 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR4A1P22736 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NR4A1P22736 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.99■□□□□ 0.63
NR4A1P22736 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
NR4A1P22736 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NR4A1P22736 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
NR4A1P22736 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
NR4A1P22736 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NR4A1P22736 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NR4A1P22736 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR4A1P22736 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NR4A1P22736 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR4A1P22736 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR4A1P22736 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR4A1P22736 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR4A1P22736 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.98■□□□□ 0.63
NR4A1P22736 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NR4A1P22736 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.98■□□□□ 0.63
NR4A1P22736 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR4A1P22736 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
NR4A1P22736 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NR4A1P22736 AP005435.1-201ENST00000529293 1178 ntBASIC18.98■□□□□ 0.63
NR4A1P22736 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.98■□□□□ 0.63
NR4A1P22736 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.98■□□□□ 0.63
NR4A1P22736 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR4A1P22736 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NR4A1P22736 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.98■□□□□ 0.63
NR4A1P22736 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NR4A1P22736 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR4A1P22736 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.98■□□□□ 0.63
NR4A1P22736 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NR4A1P22736 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR4A1P22736 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NR4A1P22736 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
NR4A1P22736 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR4A1P22736 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.97■□□□□ 0.63
NR4A1P22736 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR4A1P22736 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR4A1P22736 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.97■□□□□ 0.63
NR4A1P22736 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
NR4A1P22736 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.97■□□□□ 0.63
NR4A1P22736 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR4A1P22736 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.97■□□□□ 0.63
NR4A1P22736 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NR4A1P22736 ZNRF2P3-201ENST00000424200 374 ntBASIC18.97■□□□□ 0.63
NR4A1P22736 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.97■□□□□ 0.63
NR4A1P22736 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.97■□□□□ 0.63
NR4A1P22736 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
NR4A1P22736 AC006128.1-201ENST00000624704 1661 ntBASIC18.97■□□□□ 0.63
NR4A1P22736 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
NR4A1P22736 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
NR4A1P22736 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR4A1P22736 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR4A1P22736 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR4A1P22736 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR4A1P22736 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR4A1P22736 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR4A1P22736 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
NR4A1P22736 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR4A1P22736 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NR4A1P22736 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR4A1P22736 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.96■□□□□ 0.63
NR4A1P22736 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.96■□□□□ 0.63
NR4A1P22736 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.96■□□□□ 0.63
NR4A1P22736 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NR4A1P22736 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NR4A1P22736 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.96■□□□□ 0.63
NR4A1P22736 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
NR4A1P22736 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NR4A1P22736 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR4A1P22736 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NR4A1P22736 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms