Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.58■■□□□ 1.04
RARAP10276 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RARAP10276 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
RARAP10276 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RARAP10276 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RARAP10276 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RARAP10276 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RARAP10276 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.58■■□□□ 1.04
RARAP10276 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.58■■□□□ 1.04
RARAP10276 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RARAP10276 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
RARAP10276 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RARAP10276 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RARAP10276 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.57■■□□□ 1.04
RARAP10276 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RARAP10276 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RARAP10276 KRT18P20-201ENST00000548986 1279 ntBASIC21.57■■□□□ 1.04
RARAP10276 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.57■■□□□ 1.04
RARAP10276 AC087623.3-201ENST00000607047 1098 ntBASIC21.57■■□□□ 1.04
RARAP10276 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RARAP10276 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RARAP10276 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RARAP10276 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.57■■□□□ 1.04
RARAP10276 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RARAP10276 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RARAP10276 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RARAP10276 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RARAP10276 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RARAP10276 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RARAP10276 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RARAP10276 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.56■■□□□ 1.04
RARAP10276 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RARAP10276 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RARAP10276 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RARAP10276 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RARAP10276 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RARAP10276 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RARAP10276 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RARAP10276 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RARAP10276 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.56■■□□□ 1.04
RARAP10276 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RARAP10276 AC020907.5-201ENST00000624372 1936 ntBASIC21.56■■□□□ 1.04
RARAP10276 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RARAP10276 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RARAP10276 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
RARAP10276 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
RARAP10276 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RARAP10276 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RARAP10276 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.56■■□□□ 1.04
RARAP10276 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RARAP10276 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RARAP10276 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RARAP10276 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RARAP10276 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RARAP10276 KRT19P1-201ENST00000405746 1186 ntBASIC21.55■■□□□ 1.04
RARAP10276 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RARAP10276 AC034268.1-201ENST00000441047 882 ntBASIC21.55■■□□□ 1.04
RARAP10276 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RARAP10276 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RARAP10276 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.55■■□□□ 1.04
RARAP10276 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RARAP10276 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RARAP10276 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
RARAP10276 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RARAP10276 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RARAP10276 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RARAP10276 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RARAP10276 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RARAP10276 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RARAP10276 AC011484.1-201ENST00000377652 1995 ntBASIC21.54■■□□□ 1.04
RARAP10276 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RARAP10276 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RARAP10276 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
RARAP10276 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RARAP10276 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RARAP10276 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RARAP10276 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RARAP10276 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RARAP10276 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
RARAP10276 AC245052.3-201ENST00000450182 901 ntBASIC21.54■■□□□ 1.04
RARAP10276 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.54■■□□□ 1.04
RARAP10276 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.54■■□□□ 1.04
RARAP10276 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.54■■□□□ 1.04
RARAP10276 NTF6G-201ENST00000591094 616 ntBASIC21.54■■□□□ 1.04
RARAP10276 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RARAP10276 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RARAP10276 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RARAP10276 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RARAP10276 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RARAP10276 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.54■■□□□ 1.04
RARAP10276 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RARAP10276 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.54■■□□□ 1.04
RARAP10276 AC007952.6-201ENST00000573168 2673 ntBASIC21.53■■□□□ 1.04
RARAP10276 AC003957.1-201ENST00000625108 2673 ntBASIC21.53■■□□□ 1.04
RARAP10276 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RARAP10276 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
RARAP10276 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RARAP10276 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RARAP10276 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RARAP10276 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms