Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.71■□□□□ 0.59
FREM3P0C091 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.71■□□□□ 0.59
FREM3P0C091 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.71■□□□□ 0.59
FREM3P0C091 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.71■□□□□ 0.59
FREM3P0C091 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.71■□□□□ 0.59
FREM3P0C091 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FREM3P0C091 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.71■□□□□ 0.59
FREM3P0C091 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
FREM3P0C091 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FREM3P0C091 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FREM3P0C091 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FREM3P0C091 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
FREM3P0C091 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FREM3P0C091 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
FREM3P0C091 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.71■□□□□ 0.59
FREM3P0C091 AC091874.3-201ENST00000512672 1195 ntBASIC18.71■□□□□ 0.59
FREM3P0C091 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
FREM3P0C091 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.71■□□□□ 0.59
FREM3P0C091 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
FREM3P0C091 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FREM3P0C091 AC087633.2-202ENST00000565166 1439 ntBASIC18.7■□□□□ 0.58
FREM3P0C091 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
FREM3P0C091 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FREM3P0C091 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FREM3P0C091 RARRES2P4-201ENST00000514074 484 ntBASIC18.7■□□□□ 0.58
FREM3P0C091 RNA5SP413-201ENST00000516373 109 ntBASIC18.7■□□□□ 0.58
FREM3P0C091 AL356652.1-201ENST00000615962 565 ntBASIC18.7■□□□□ 0.58
FREM3P0C091 MYC-209ENST00000641252 345 ntBASIC18.7■□□□□ 0.58
FREM3P0C091 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
FREM3P0C091 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.7■□□□□ 0.58
FREM3P0C091 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.7■□□□□ 0.58
FREM3P0C091 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.7■□□□□ 0.58
FREM3P0C091 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FREM3P0C091 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
FREM3P0C091 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
FREM3P0C091 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.7■□□□□ 0.58
FREM3P0C091 AC093787.1-201ENST00000450396 207 ntBASIC18.7■□□□□ 0.58
FREM3P0C091 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.7■□□□□ 0.58
FREM3P0C091 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.7■□□□□ 0.58
FREM3P0C091 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
FREM3P0C091 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FREM3P0C091 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FREM3P0C091 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
FREM3P0C091 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FREM3P0C091 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
FREM3P0C091 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FREM3P0C091 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
FREM3P0C091 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FREM3P0C091 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FREM3P0C091 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.69■□□□□ 0.58
FREM3P0C091 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FREM3P0C091 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.69■□□□□ 0.58
FREM3P0C091 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.69■□□□□ 0.58
FREM3P0C091 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
FREM3P0C091 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.69■□□□□ 0.58
FREM3P0C091 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FREM3P0C091 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.69■□□□□ 0.58
FREM3P0C091 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FREM3P0C091 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FREM3P0C091 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FREM3P0C091 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.68■□□□□ 0.58
FREM3P0C091 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.68■□□□□ 0.58
FREM3P0C091 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FREM3P0C091 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FREM3P0C091 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FREM3P0C091 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FREM3P0C091 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
FREM3P0C091 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
FREM3P0C091 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
FREM3P0C091 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.68■□□□□ 0.58
FREM3P0C091 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.68■□□□□ 0.58
FREM3P0C091 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.68■□□□□ 0.58
FREM3P0C091 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.68■□□□□ 0.58
FREM3P0C091 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.68■□□□□ 0.58
FREM3P0C091 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FREM3P0C091 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FREM3P0C091 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FREM3P0C091 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FREM3P0C091 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.68■□□□□ 0.58
FREM3P0C091 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FREM3P0C091 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FREM3P0C091 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.67■□□□□ 0.58
FREM3P0C091 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FREM3P0C091 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FREM3P0C091 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.67■□□□□ 0.58
FREM3P0C091 CDV3P1-201ENST00000471403 739 ntBASIC18.67■□□□□ 0.58
FREM3P0C091 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.67■□□□□ 0.58
FREM3P0C091 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.67■□□□□ 0.58
FREM3P0C091 CYP2T3P-201ENST00000601990 817 ntBASIC18.67■□□□□ 0.58
FREM3P0C091 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FREM3P0C091 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
FREM3P0C091 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FREM3P0C091 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.67■□□□□ 0.58
FREM3P0C091 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.67■□□□□ 0.58
FREM3P0C091 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FREM3P0C091 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FREM3P0C091 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
FREM3P0C091 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
FREM3P0C091 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FREM3P0C091 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms