Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1AP08908 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HTR1AP08908 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1AP08908 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HTR1AP08908 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HTR1AP08908 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HTR1AP08908 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.59
HTR1AP08908 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.77■□□□□ 0.59
HTR1AP08908 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.77■□□□□ 0.59
HTR1AP08908 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
HTR1AP08908 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1AP08908 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
HTR1AP08908 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HTR1AP08908 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HTR1AP08908 OR2I1P-207ENST00000453522 948 ntBASIC18.76■□□□□ 0.59
HTR1AP08908 AC010141.3-201ENST00000456659 717 ntBASIC18.76■□□□□ 0.59
HTR1AP08908 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.76■□□□□ 0.59
HTR1AP08908 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.76■□□□□ 0.59
HTR1AP08908 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HTR1AP08908 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HTR1AP08908 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1AP08908 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1AP08908 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HTR1AP08908 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1AP08908 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1AP08908 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.76■□□□□ 0.59
HTR1AP08908 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.76■□□□□ 0.59
HTR1AP08908 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1AP08908 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1AP08908 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HTR1AP08908 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.75■□□□□ 0.59
HTR1AP08908 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
HTR1AP08908 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HTR1AP08908 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1AP08908 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1AP08908 KRT16P3-201ENST00000439127 1283 ntBASIC18.75■□□□□ 0.59
HTR1AP08908 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.75■□□□□ 0.59
HTR1AP08908 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.75■□□□□ 0.59
HTR1AP08908 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1AP08908 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
HTR1AP08908 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.75■□□□□ 0.59
HTR1AP08908 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
HTR1AP08908 AP004607.7-201ENST00000527152 1677 ntBASIC18.75■□□□□ 0.59
HTR1AP08908 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.75■□□□□ 0.59
HTR1AP08908 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1AP08908 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1AP08908 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.74■□□□□ 0.59
HTR1AP08908 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HTR1AP08908 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.74■□□□□ 0.59
HTR1AP08908 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HTR1AP08908 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.74■□□□□ 0.59
HTR1AP08908 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HTR1AP08908 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HTR1AP08908 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.74■□□□□ 0.59
HTR1AP08908 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.74■□□□□ 0.59
HTR1AP08908 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HTR1AP08908 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HTR1AP08908 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.74■□□□□ 0.59
HTR1AP08908 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HTR1AP08908 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HTR1AP08908 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HTR1AP08908 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HTR1AP08908 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HTR1AP08908 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.73■□□□□ 0.59
HTR1AP08908 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HTR1AP08908 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HTR1AP08908 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HTR1AP08908 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.73■□□□□ 0.59
HTR1AP08908 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HTR1AP08908 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.73■□□□□ 0.59
HTR1AP08908 MIR3181-201ENST00000578512 73 ntBASIC18.73■□□□□ 0.59
HTR1AP08908 AL356740.2-201ENST00000601559 647 ntBASIC18.73■□□□□ 0.59
HTR1AP08908 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HTR1AP08908 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
HTR1AP08908 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.73■□□□□ 0.59
HTR1AP08908 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HTR1AP08908 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HTR1AP08908 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.73■□□□□ 0.59
HTR1AP08908 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HTR1AP08908 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR1AP08908 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR1AP08908 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HTR1AP08908 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR1AP08908 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR1AP08908 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HTR1AP08908 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
HTR1AP08908 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HTR1AP08908 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR1AP08908 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HTR1AP08908 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR1AP08908 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR1AP08908 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HTR1AP08908 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HTR1AP08908 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR1AP08908 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR1AP08908 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
HTR1AP08908 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.72■□□□□ 0.59
HTR1AP08908 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
HTR1AP08908 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HTR1AP08908 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms