Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSDP07339 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSDP07339 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CTSDP07339 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.06■□□□□ 0.32
CTSDP07339 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.06■□□□□ 0.32
CTSDP07339 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTSDP07339 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CTSDP07339 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSDP07339 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSDP07339 AC087289.5-201ENST00000586076 3175 ntBASIC17.05■□□□□ 0.32
CTSDP07339 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
CTSDP07339 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CTSDP07339 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CTSDP07339 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.05■□□□□ 0.32
CTSDP07339 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CTSDP07339 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSDP07339 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.05■□□□□ 0.32
CTSDP07339 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSDP07339 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.05■□□□□ 0.32
CTSDP07339 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.05■□□□□ 0.32
CTSDP07339 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.05■□□□□ 0.32
CTSDP07339 AL512631.2-201ENST00000604634 923 ntBASIC17.05■□□□□ 0.32
CTSDP07339 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
CTSDP07339 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSDP07339 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSDP07339 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSDP07339 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSDP07339 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSDP07339 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSDP07339 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSDP07339 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTSDP07339 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSDP07339 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CTSDP07339 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CTSDP07339 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSDP07339 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSDP07339 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSDP07339 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.04■□□□□ 0.32
CTSDP07339 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTSDP07339 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CTSDP07339 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTSDP07339 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTSDP07339 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTSDP07339 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CTSDP07339 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSDP07339 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.04■□□□□ 0.32
CTSDP07339 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.04■□□□□ 0.32
CTSDP07339 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CTSDP07339 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSDP07339 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSDP07339 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTSDP07339 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.04■□□□□ 0.32
CTSDP07339 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSDP07339 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTSDP07339 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTSDP07339 AC018445.3-201ENST00000624177 1945 ntBASIC17.04■□□□□ 0.32
CTSDP07339 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CTSDP07339 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTSDP07339 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
CTSDP07339 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.03■□□□□ 0.32
CTSDP07339 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.03■□□□□ 0.32
CTSDP07339 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CTSDP07339 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.03■□□□□ 0.32
CTSDP07339 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.03■□□□□ 0.32
CTSDP07339 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTSDP07339 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTSDP07339 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
CTSDP07339 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.03■□□□□ 0.32
CTSDP07339 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.03■□□□□ 0.32
CTSDP07339 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.03■□□□□ 0.32
CTSDP07339 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CTSDP07339 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CTSDP07339 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTSDP07339 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTSDP07339 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.03■□□□□ 0.32
CTSDP07339 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.03■□□□□ 0.32
CTSDP07339 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTSDP07339 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTSDP07339 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CTSDP07339 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CTSDP07339 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTSDP07339 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTSDP07339 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.02■□□□□ 0.32
CTSDP07339 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTSDP07339 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CTSDP07339 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CTSDP07339 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.02■□□□□ 0.32
CTSDP07339 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.02■□□□□ 0.32
CTSDP07339 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CTSDP07339 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.02■□□□□ 0.31
CTSDP07339 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
CTSDP07339 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CTSDP07339 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CTSDP07339 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTSDP07339 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTSDP07339 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.01■□□□□ 0.31
CTSDP07339 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTSDP07339 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.01■□□□□ 0.31
CTSDP07339 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.01■□□□□ 0.31
CTSDP07339 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms