Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.16■□□□□ 0.34
GAPDHP04406 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GAPDHP04406 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GAPDHP04406 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.16■□□□□ 0.34
GAPDHP04406 AC019069.1-201ENST00000610008 1333 ntBASIC17.16■□□□□ 0.34
GAPDHP04406 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GAPDHP04406 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.16■□□□□ 0.34
GAPDHP04406 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GAPDHP04406 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
GAPDHP04406 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.15■□□□□ 0.34
GAPDHP04406 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
GAPDHP04406 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
GAPDHP04406 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GAPDHP04406 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAPDHP04406 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAPDHP04406 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAPDHP04406 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
GAPDHP04406 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GAPDHP04406 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GAPDHP04406 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAPDHP04406 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAPDHP04406 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GAPDHP04406 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GAPDHP04406 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GAPDHP04406 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.15■□□□□ 0.34
GAPDHP04406 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GAPDHP04406 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAPDHP04406 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAPDHP04406 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GAPDHP04406 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GAPDHP04406 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GAPDHP04406 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAPDHP04406 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.15■□□□□ 0.34
GAPDHP04406 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
GAPDHP04406 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAPDHP04406 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAPDHP04406 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAPDHP04406 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GAPDHP04406 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.15■□□□□ 0.34
GAPDHP04406 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.15■□□□□ 0.34
GAPDHP04406 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
GAPDHP04406 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAPDHP04406 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
GAPDHP04406 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAPDHP04406 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAPDHP04406 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAPDHP04406 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GAPDHP04406 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GAPDHP04406 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAPDHP04406 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.14■□□□□ 0.33
GAPDHP04406 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
GAPDHP04406 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAPDHP04406 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GAPDHP04406 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.14■□□□□ 0.33
GAPDHP04406 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAPDHP04406 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.13■□□□□ 0.33
GAPDHP04406 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAPDHP04406 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAPDHP04406 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAPDHP04406 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
GAPDHP04406 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GAPDHP04406 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.13■□□□□ 0.33
GAPDHP04406 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAPDHP04406 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.13■□□□□ 0.33
GAPDHP04406 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GAPDHP04406 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAPDHP04406 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GAPDHP04406 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAPDHP04406 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAPDHP04406 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAPDHP04406 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.13■□□□□ 0.33
GAPDHP04406 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.13■□□□□ 0.33
GAPDHP04406 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.13■□□□□ 0.33
GAPDHP04406 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.13■□□□□ 0.33
GAPDHP04406 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.13■□□□□ 0.33
GAPDHP04406 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.13■□□□□ 0.33
GAPDHP04406 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAPDHP04406 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAPDHP04406 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAPDHP04406 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.13■□□□□ 0.33
GAPDHP04406 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAPDHP04406 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GAPDHP04406 BX323043.1-201ENST00000641006 1765 ntBASIC17.12■□□□□ 0.33
GAPDHP04406 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
GAPDHP04406 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GAPDHP04406 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAPDHP04406 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GAPDHP04406 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAPDHP04406 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAPDHP04406 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
GAPDHP04406 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GAPDHP04406 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.12■□□□□ 0.33
GAPDHP04406 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAPDHP04406 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.12■□□□□ 0.33
GAPDHP04406 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.12■□□□□ 0.33
GAPDHP04406 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
GAPDHP04406 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAPDHP04406 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAPDHP04406 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAPDHP04406 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms