Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND1P03886 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND1P03886 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND1P03886 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND1P03886 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND1P03886 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND1P03886 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND1P03886 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
MT-ND1P03886 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND1P03886 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.36■□□□□ 0.69
MT-ND1P03886 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
MT-ND1P03886 AC131212.1-201ENST00000613771 668 ntBASIC19.36■□□□□ 0.69
MT-ND1P03886 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND1P03886 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND1P03886 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.36■□□□□ 0.69
MT-ND1P03886 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND1P03886 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
MT-ND1P03886 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MT-ND1P03886 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.35■□□□□ 0.69
MT-ND1P03886 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MT-ND1P03886 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.35■□□□□ 0.69
MT-ND1P03886 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.35■□□□□ 0.69
MT-ND1P03886 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.35■□□□□ 0.69
MT-ND1P03886 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.35■□□□□ 0.69
MT-ND1P03886 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MT-ND1P03886 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MT-ND1P03886 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.35■□□□□ 0.69
MT-ND1P03886 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
MT-ND1P03886 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
MT-ND1P03886 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.34■□□□□ 0.69
MT-ND1P03886 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MT-ND1P03886 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MT-ND1P03886 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MT-ND1P03886 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MT-ND1P03886 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MT-ND1P03886 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.34■□□□□ 0.69
MT-ND1P03886 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MT-ND1P03886 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MT-ND1P03886 AL020996.1-203ENST00000536896 2307 ntBASIC19.34■□□□□ 0.69
MT-ND1P03886 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MT-ND1P03886 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.34■□□□□ 0.69
MT-ND1P03886 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
MT-ND1P03886 AC233992.3-201ENST00000607491 485 ntBASIC19.34■□□□□ 0.69
MT-ND1P03886 AL136162.1-201ENST00000607711 1078 ntBASIC19.34■□□□□ 0.69
MT-ND1P03886 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MT-ND1P03886 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
MT-ND1P03886 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.34■□□□□ 0.69
MT-ND1P03886 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MT-ND1P03886 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
MT-ND1P03886 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
MT-ND1P03886 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MT-ND1P03886 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
MT-ND1P03886 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MT-ND1P03886 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MT-ND1P03886 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
MT-ND1P03886 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.33■□□□□ 0.69
MT-ND1P03886 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MT-ND1P03886 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MT-ND1P03886 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MT-ND1P03886 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MT-ND1P03886 AC024257.2-201ENST00000549699 147 ntBASIC19.33■□□□□ 0.68
MT-ND1P03886 AC133561.4-201ENST00000566112 224 ntBASIC19.33■□□□□ 0.68
MT-ND1P03886 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.33■□□□□ 0.68
MT-ND1P03886 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.33■□□□□ 0.68
MT-ND1P03886 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.33■□□□□ 0.68
MT-ND1P03886 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MT-ND1P03886 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MT-ND1P03886 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MT-ND1P03886 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MT-ND1P03886 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MT-ND1P03886 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MT-ND1P03886 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
MT-ND1P03886 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MT-ND1P03886 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MT-ND1P03886 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
MT-ND1P03886 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
MT-ND1P03886 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND1P03886 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.32■□□□□ 0.68
MT-ND1P03886 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.32■□□□□ 0.68
MT-ND1P03886 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.32■□□□□ 0.68
MT-ND1P03886 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND1P03886 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.32■□□□□ 0.68
MT-ND1P03886 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND1P03886 AC135279.3-201ENST00000610945 1311 ntBASIC19.32■□□□□ 0.68
MT-ND1P03886 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
MT-ND1P03886 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND1P03886 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
MT-ND1P03886 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND1P03886 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND1P03886 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND1P03886 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.32■□□□□ 0.68
MT-ND1P03886 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.32■□□□□ 0.68
MT-ND1P03886 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND1P03886 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND1P03886 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND1P03886 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND1P03886 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.32■□□□□ 0.68
MT-ND1P03886 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND1P03886 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.31■□□□□ 0.68
MT-ND1P03886 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms