Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 HTR7P1-201ENST00000538670 1336 ntBASIC23.71■■□□□ 1.39
ALDH1A1P00352 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ALDH1A1P00352 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
ALDH1A1P00352 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC23.71■■□□□ 1.39
ALDH1A1P00352 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.71■■□□□ 1.39
ALDH1A1P00352 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ALDH1A1P00352 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
ALDH1A1P00352 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.7■■□□□ 1.39
ALDH1A1P00352 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.7■■□□□ 1.39
ALDH1A1P00352 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
ALDH1A1P00352 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
ALDH1A1P00352 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
ALDH1A1P00352 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
ALDH1A1P00352 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
ALDH1A1P00352 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
ALDH1A1P00352 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.7■■□□□ 1.39
ALDH1A1P00352 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
ALDH1A1P00352 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ALDH1A1P00352 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.7■■□□□ 1.38
ALDH1A1P00352 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ALDH1A1P00352 AC113347.1-201ENST00000413321 391 ntBASIC23.7■■□□□ 1.38
ALDH1A1P00352 KRT16P5-201ENST00000455284 522 ntBASIC23.7■■□□□ 1.38
ALDH1A1P00352 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.7■■□□□ 1.38
ALDH1A1P00352 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.7■■□□□ 1.38
ALDH1A1P00352 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ALDH1A1P00352 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.7■■□□□ 1.38
ALDH1A1P00352 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.7■■□□□ 1.38
ALDH1A1P00352 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ALDH1A1P00352 AC092053.2-201ENST00000640557 1818 ntBASIC23.7■■□□□ 1.38
ALDH1A1P00352 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.7■■□□□ 1.38
ALDH1A1P00352 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ALDH1A1P00352 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ALDH1A1P00352 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ALDH1A1P00352 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ALDH1A1P00352 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
ALDH1A1P00352 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.69■■□□□ 1.38
ALDH1A1P00352 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
ALDH1A1P00352 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.69■■□□□ 1.38
ALDH1A1P00352 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.69■■□□□ 1.38
ALDH1A1P00352 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
ALDH1A1P00352 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC23.69■■□□□ 1.38
ALDH1A1P00352 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.69■■□□□ 1.38
ALDH1A1P00352 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.69■■□□□ 1.38
ALDH1A1P00352 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ALDH1A1P00352 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ALDH1A1P00352 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
ALDH1A1P00352 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
ALDH1A1P00352 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.68■■□□□ 1.38
ALDH1A1P00352 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ALDH1A1P00352 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ALDH1A1P00352 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
ALDH1A1P00352 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.68■■□□□ 1.38
ALDH1A1P00352 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC23.68■■□□□ 1.38
ALDH1A1P00352 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ALDH1A1P00352 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
ALDH1A1P00352 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.68■■□□□ 1.38
ALDH1A1P00352 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.68■■□□□ 1.38
ALDH1A1P00352 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.68■■□□□ 1.38
ALDH1A1P00352 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.68■■□□□ 1.38
ALDH1A1P00352 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
ALDH1A1P00352 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ALDH1A1P00352 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ALDH1A1P00352 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ALDH1A1P00352 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.67■■□□□ 1.38
ALDH1A1P00352 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.67■■□□□ 1.38
ALDH1A1P00352 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.67■■□□□ 1.38
ALDH1A1P00352 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ALDH1A1P00352 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ALDH1A1P00352 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ALDH1A1P00352 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
ALDH1A1P00352 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.67■■□□□ 1.38
ALDH1A1P00352 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
ALDH1A1P00352 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC23.67■■□□□ 1.38
ALDH1A1P00352 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ALDH1A1P00352 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
ALDH1A1P00352 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ALDH1A1P00352 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
ALDH1A1P00352 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ALDH1A1P00352 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.66■■□□□ 1.38
ALDH1A1P00352 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ALDH1A1P00352 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ALDH1A1P00352 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ALDH1A1P00352 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ALDH1A1P00352 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ALDH1A1P00352 UNC93B2-201ENST00000285383 730 ntBASIC23.66■■□□□ 1.38
ALDH1A1P00352 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
ALDH1A1P00352 FAM197Y1-201ENST00000421178 764 ntBASIC23.66■■□□□ 1.38
ALDH1A1P00352 RBM17P1-201ENST00000453646 1190 ntBASIC23.66■■□□□ 1.38
ALDH1A1P00352 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.66■■□□□ 1.38
ALDH1A1P00352 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
ALDH1A1P00352 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.66■■□□□ 1.38
ALDH1A1P00352 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC23.66■■□□□ 1.38
ALDH1A1P00352 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
ALDH1A1P00352 AC073195.1-201ENST00000607241 877 ntBASIC23.66■■□□□ 1.38
ALDH1A1P00352 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC23.66■■□□□ 1.38
ALDH1A1P00352 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ALDH1A1P00352 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ALDH1A1P00352 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ALDH1A1P00352 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.65■■□□□ 1.38
ALDH1A1P00352 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms