Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF1O95521 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PRAMEF1O95521 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF1O95521 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.48■□□□□ 0.87
PRAMEF1O95521 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF1O95521 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF1O95521 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEF1O95521 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEF1O95521 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
PRAMEF1O95521 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF1O95521 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF1O95521 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.47■□□□□ 0.87
PRAMEF1O95521 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEF1O95521 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.47■□□□□ 0.87
PRAMEF1O95521 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF1O95521 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF1O95521 AC005181.1-201ENST00000604782 1256 ntBASIC20.47■□□□□ 0.87
PRAMEF1O95521 RAP2CP1-201ENST00000605103 478 ntBASIC20.47■□□□□ 0.87
PRAMEF1O95521 FAM21FP-204ENST00000608637 956 ntBASIC20.47■□□□□ 0.87
PRAMEF1O95521 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.47■□□□□ 0.87
PRAMEF1O95521 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF1O95521 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF1O95521 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
PRAMEF1O95521 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF1O95521 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
PRAMEF1O95521 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEF1O95521 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
PRAMEF1O95521 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF1O95521 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF1O95521 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PRAMEF1O95521 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEF1O95521 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF1O95521 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.46■□□□□ 0.87
PRAMEF1O95521 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF1O95521 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF1O95521 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.46■□□□□ 0.87
PRAMEF1O95521 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF1O95521 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.46■□□□□ 0.87
PRAMEF1O95521 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF1O95521 AC026185.1-201ENST00000445748 174 ntBASIC20.46■□□□□ 0.87
PRAMEF1O95521 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PRAMEF1O95521 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.46■□□□□ 0.87
PRAMEF1O95521 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.46■□□□□ 0.87
PRAMEF1O95521 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.46■□□□□ 0.87
PRAMEF1O95521 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF1O95521 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF1O95521 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PRAMEF1O95521 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF1O95521 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF1O95521 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF1O95521 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
PRAMEF1O95521 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.45■□□□□ 0.86
PRAMEF1O95521 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.45■□□□□ 0.86
PRAMEF1O95521 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF1O95521 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF1O95521 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PRAMEF1O95521 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PRAMEF1O95521 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.45■□□□□ 0.86
PRAMEF1O95521 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.45■□□□□ 0.86
PRAMEF1O95521 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.45■□□□□ 0.86
PRAMEF1O95521 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PRAMEF1O95521 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PRAMEF1O95521 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF1O95521 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF1O95521 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF1O95521 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF1O95521 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF1O95521 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PRAMEF1O95521 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF1O95521 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF1O95521 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF1O95521 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF1O95521 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.44■□□□□ 0.86
PRAMEF1O95521 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF1O95521 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF1O95521 MIR663A-201ENST00000385250 93 ntBASIC20.44■□□□□ 0.86
PRAMEF1O95521 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.44■□□□□ 0.86
PRAMEF1O95521 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PRAMEF1O95521 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF1O95521 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.44■□□□□ 0.86
PRAMEF1O95521 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF1O95521 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF1O95521 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.43■□□□□ 0.86
PRAMEF1O95521 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.43■□□□□ 0.86
PRAMEF1O95521 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.43■□□□□ 0.86
PRAMEF1O95521 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.43■□□□□ 0.86
PRAMEF1O95521 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF1O95521 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF1O95521 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
PRAMEF1O95521 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF1O95521 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF1O95521 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF1O95521 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PRAMEF1O95521 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.43■□□□□ 0.86
PRAMEF1O95521 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.43■□□□□ 0.86
PRAMEF1O95521 RARRES2P4-201ENST00000514074 484 ntBASIC20.43■□□□□ 0.86
PRAMEF1O95521 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF1O95521 AC069236.1-201ENST00000604339 616 ntBASIC20.43■□□□□ 0.86
PRAMEF1O95521 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.43■□□□□ 0.86
PRAMEF1O95521 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms